Amycolatopsis sp. FBCC-B4732: MUY14_26640
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Entry
MUY14_26640 CDS
T08335
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
aprt
Amycolatopsis sp. FBCC-B4732
Pathway
aprt02020
Two-component system
aprt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aprt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MUY14_26640
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MUY14_26640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aprt03021
]
MUY14_26640
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
aprt02035
]
MUY14_26640
Transcription machinery [BR:
aprt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MUY14_26640
Bacterial motility proteins [BR:
aprt02035
]
Flagellar system
Flagellar assembly proteins
Stator
MUY14_26640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
UPF0122
CENP-B_N
Sigma70_ECF
HTH_23
Sds3
KORA
Motif
Other DBs
NCBI-ProteinID:
UOX85362
LinkDB
All DBs
Position
complement(6121616..6122464)
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AA seq
282 aa
AA seq
DB search
MTAGPHVTEAAGVTTHGEAAAPADTRAGYDVDAGIAALWQQFADSPDQASRDRLVLHYAP
LVKYVAGRVGTGLPTHVDVGDLVQSGIFGLVDAIEKFDPERGLRFETYAMQRIRGAILDD
LRSQDWVPRAVRSKAKEAERAMERLGARLHRTPTDAELAAELGIGLDDLRDFYGQLQLTS
VVALEDLVAAGKDSGSLVDTLPDDDAVDPVAVLVDQDNRRQLAQAIAQLTERDKIVVSLY
YFESLTLAEIGKVLGVTESRVSQLHTRAVMRLRAKLVEQTGT
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaggaccgcacgtgaccgaagccgccggagtgaccactcacggtgaggccgcc
gcgcccgcggacacccgcgccggctacgacgtcgacgccgggatcgcggcgctgtggcag
cagttcgccgacagccccgaccaggcgtcgcgcgatcggctcgtgctgcactacgccccg
ctggtcaagtacgtcgcgggccgggtcggcaccggcctgcccacgcacgtcgacgtcggt
gacctcgtgcagtcgggcatcttcggcctcgtcgacgcgatcgagaagttcgaccccgag
cgcggcctgcgcttcgagacgtacgcgatgcagcgcatccgcggcgccatcctcgacgac
ctccggtcgcaggactgggtgccccgcgcggtccgcagcaaggccaaggaggccgagcgc
gcgatggagcgcctcggcgcccgcctgcaccgcacgccgaccgacgcggagctcgccgcc
gaactcggcatcggcctcgacgacctgcgcgacttctacggccagctgcagctgaccagc
gtcgtcgcgctggaggacctggtggccgccggcaaggacagcgggtcactggtcgacacg
ctgcccgacgacgacgccgtcgacccggtcgcggtgctcgtcgaccaggacaaccgccgc
cagctcgcgcaggcgatcgcgcagctcaccgagcgcgacaagatcgtcgtcagcctctac
tacttcgagagcctgaccctcgccgagatcggcaaggtcctcggtgtcaccgagtcgcgg
gtcagccagctgcacacccgggccgtcatgcgcctgcgcgccaagctcgtcgagcagacc
ggcacctga
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