Amycolatopsis pretoriensis: MUY14_27880
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Entry
MUY14_27880 CDS
T08335
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aprt
Amycolatopsis pretoriensis
Brite
KEGG Orthology (KO) [BR:
aprt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aprt03400
]
MUY14_27880
DNA repair and recombination proteins [BR:
aprt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MUY14_27880
Archaeal homologous recombinant proteins
MUY14_27880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
AAA_21
AAA_27
MMR_HSR1
RsgA_GTPase
AAA_15
Motif
Other DBs
NCBI-ProteinID:
UOX85595
LinkDB
All DBs
Position
complement(6381890..6385291)
Genome browser
AA seq
1133 aa
AA seq
DB search
MRPVLLEMTGFASFREKTEVSFADTDYFALVGPTGAGKSTVIDALTFALYGSVARWDHEG
LVAPALAPTANRATVRLVFDAGGTRYHVVREVRRSGGKKPTVSVKNVRLERLVDPTALGG
PEDDADPVAADSEVTPAVERLLGLTFKHFCTCVALPQGDFAEFLHAKAADRQKILIKLLG
LEVYERIGRRAGVTAEQQKQRAAVLTEQLGSYADATAEAVDALAARMTALAELDARVTAA
LPGLNDATRAHDEARQRVAALTKELSVLDALERPDGVEDLETRRRAAVDATTAARAGLEA
GEAADEAARAALAAAPDRGELERIRAARAELAEAEKALPGLEEAAKSATAAKTAASAAVA
EAVAAVESARKTRDTTARAAEDAAARAEASRRERDRLSGVRPPADLGDLSEEAARVAKRT
AEADARLRAAETADAEARAALAAQPDVAPLAAARSDARTLYAVAEAQRKAAPEQAARRTE
LEAARSAFADADAEVTAAKAAVTEADRAGQALGLRAGLAVGHPCPVCEQEVAALPDAGGH
AHLAEARERLERAEAARAAAESALRKLERAVDRDADSAASAAAQAEELREVLAGVAGPPE
SVVLRRPVEAAFSEQDYADLVTAVRERGEWLSATIDARTRVAEAATAADRELAAARTGRA
AAQREADVVEKSFAAAKEALRAARDPLVELGAPAVDTGDVPAGWRLLTSWAASAVEDRRT
ALAALEAAAEAAGKEAVVAADDLASAERAAEQRRKQAEEAALAEQSASTAVTTTRRRHGE
LVETLKDAPSAEAVTEQLARVAELERAAKAADAGLRTARAAAKQAAEAQARVAEQVAAER
QRLSRARDPLVGLGAPPIDGESLLAAWTALTDWAAGQASEHRDRLAAAGTAEREAAEALR
AAERAVAGDITALEVELPEGSVRDRAPVALATARARAEADHTEMKRRVAHVAGLQADIAA
AEAESQVARLLADLLRSDKFPRWLIAGALDTLVAEASASLLELSGGQFELTHDKGDFLVV
DHNEADARRPVKTLSGGETFQASLSLALALSSQLGAMAAEGATRLESIFLDEGFGTLDEA
TLDVVASTLENLAATGSRMVGVITHVPALAERVPVRFLVTRDGSGSHIGREGA
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcggccagtgctgctggagatgaccggcttcgcgtccttccgcgagaagaccgaagtc
agcttcgcggacaccgactacttcgccctcgtcgggccgaccggcgcgggcaagagcacc
gtgatcgacgcgctcaccttcgccctctacggctccgtcgcccgctgggaccacgaaggc
ctggtcgcgcccgcgctcgcgccgacggcgaaccgggccaccgtgcggctggtgttcgac
gcgggcggcacgcgctaccacgtcgtgcgggaagtccggcgcagcggcgggaagaaaccc
acggtcagcgtcaagaacgtccgcctggaacggctggtcgaccccaccgcgctcggcggg
ccggaggacgacgccgacccggtcgccgcggactccgaggtcaccccggcggtcgaacgc
ctgctcgggttgacgttcaagcacttctgcacctgcgtggcgctgccgcagggcgacttc
gcggagttcctgcacgccaaggccgccgaccggcagaagatcctcatcaagctgctgggc
ctggaggtctacgagcggatcggccgccgcgccggtgtgacggcggagcagcagaagcag
cgggcggccgtcctcaccgaacagctgggcagctacgccgacgcgaccgcggaggccgtc
gacgcgctcgccgcgcggatgaccgccctcgccgagctggacgcgcgcgtgaccgcggcc
ctgcccgggctgaacgacgcgacccgcgcgcacgacgaagcgcggcaacgcgtcgccgcg
ctgacgaaggaactgagcgtcctcgacgcgctggaacgcccggacggcgtcgaagacctc
gaaacccggcgccgggcggcggtcgacgcgacgacggccgcgcgggccgggctggaagcc
ggtgaggcggcggacgaagcggctcgtgccgcgctggccgccgcgccggaccgcggcgag
ctggaacggatccgcgccgcccgcgcggaactcgccgaagccgagaaggcactcccgggc
ctggaagaagcggcgaaatcggcaacggcggcgaagacggccgcgtcggcggcggtcgcc
gaagccgtggccgcggtcgagtcggcccgcaagacccgggacaccaccgcccgcgccgcc
gaggacgcggccgcgcgggcggaggcgtcccgccgggaacgcgaccggctgagcggggtg
cggccgcccgcggatctcggcgacctgtcggaagaggcggcgcgggtggcgaagcgcacg
gccgaggccgacgcccgcctgcgcgccgccgagaccgccgacgccgaagcccgcgcggcg
ctggccgcgcagcccgacgtcgccccgctggccgccgcgcgctccgacgcccggacgctc
tacgcggtcgccgaagcccagcgcaaggccgcgcccgagcaggccgcgcgccggacggaa
ctcgaagcggcgcgaagcgccttcgccgatgccgacgccgaagtcaccgcggcgaaggcg
gcggtgaccgaagccgaccgggccgggcaggcgctgggcctgcgggccgggctcgccgtc
gggcacccgtgcccggtgtgcgagcaggaagtcgcggcgctgcccgacgccggcgggcac
gcccacctcgccgaggcgcgggaacgcctggagcgggccgaagccgcccgcgccgccgcc
gagtccgcgctgcgcaagctggaacgggccgtggaccgcgacgccgactccgccgcgtcg
gcggccgcgcaggcggaagaactgcgcgaggtgctcgcgggagtggccggaccaccggag
tcggtggtcctgcgccgccccgtcgaggcggcgttttccgagcaggactacgcggatctc
gtcacggccgtgcgggagcggggcgagtggctgtcggcgacgatcgacgcccgcacccgc
gtcgccgaggccgcgaccgccgccgaccgggagctggcggcggcccgcaccggccgcgcg
gccgcacagcgcgaggccgacgtcgtcgaaaagtcgttcgccgcggccaaggaagcactg
cgggcggcccgcgatcccctggtggagctgggcgcgcccgcggtcgacaccggggacgtc
ccggcgggctggcggctgctgacgtcgtgggcggcgtcggcggtcgaggaccggcggacc
gcgctggccgcgctcgaagcggccgccgaagccgcgggcaaggaagccgtcgtcgcggcg
gacgacctcgcctccgccgaacgggccgccgagcagcggcggaagcaagcggaggaagcg
gcgctggccgagcagtcggcgagcaccgcggtgaccacgacccggcgccggcacggtgaa
ctggtcgaaacgctgaaggacgcgccgtcggccgaagccgtcaccgagcagctcgcgcgg
gtcgccgaactggaacgagccgcgaaagccgccgacgccggcctgcggaccgcccgcgcg
gccgcgaaacaagcggcggaagcccaggcccgcgtcgccgagcaggtggcggcggaacgg
cagcggctgtcccgcgcacgcgatcccctcgtcggtctgggtgcgccgccgatcgacggc
gaaagcctgctcgccgcctggaccgcgttgacggactgggcggccgggcaggcgagcgag
caccgcgaccggctggccgccgccggcaccgccgagcgcgaggccgccgaagcgttgcgg
gcggccgaacgcgcggtcgcgggcgacatcaccgcgctcgaggtcgagctgcccgaagga
tcggtgcgggaccgggcgccggtggccctcgcgaccgcgcgggcccgcgccgaagccgac
cacacggaaatgaagcggcgcgtggcgcacgtggcggggctgcaggccgacatcgcggcc
gcggaggcggagtcgcaggtcgcgcggctgctcgcggatctgctgcgctcggacaagttc
ccgcgctggctcatcgcgggtgcgctcgacacgctggtcgccgaggcgtcggcgtcgctg
ctcgaactctccggcggccagttcgagctcacccacgacaagggcgatttcctggtggtg
gaccacaacgaggccgacgcgcggcgcccggtcaagacgctgtccggcggggagacgttc
caggcgtcgctttcgctggcgctggcgttgtcgtcgcagctcggcgcgatggccgcggag
ggcgcgacccggctcgagtccatcttcctcgacgaaggtttcgggacgctggacgaagcc
accctcgacgtcgtggcgtccacgctggagaacctcgccgccaccggctcccggatggtc
ggggtgatcacgcacgtgccggcgctggccgagcgcgtcccggtgcggttcctggtcacc
cgcgacgggtccggctcgcacatcggcagggagggcgcatga
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