Amycolatopsis sp. FBCC-B4732: MUY14_27895
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Entry
MUY14_27895 CDS
T08335
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
aprt
Amycolatopsis sp. FBCC-B4732
Brite
KEGG Orthology (KO) [BR:
aprt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aprt03032
]
MUY14_27895
03036 Chromosome and associated proteins [BR:
aprt03036
]
MUY14_27895
03400 DNA repair and recombination proteins [BR:
aprt03400
]
MUY14_27895
DNA replication proteins [BR:
aprt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MUY14_27895
Chromosome and associated proteins [BR:
aprt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MUY14_27895
DNA repair and recombination proteins [BR:
aprt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MUY14_27895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
UOX85598
LinkDB
All DBs
Position
6388870..6389532
Genome browser
AA seq
220 aa
AA seq
DB search
MTNKAQLIEALSERLGDKKVASQAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGEAVRVKKTNVPAFRAGTTFKDVISGTKKLPKATPVKRAAAATTTRATATKAAAA
APAKATTTRTTRAAAAKPATTRATTTRTRAAAAKPAAKATATKAAPKTAAKTTAAKATTA
KATTTRAKAAAKPAATKTAAAKKPAAAKAPAKRTSAAKKK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacaaggcccagctgatcgaggcgctgtcggagcgtctgggcgacaagaaggtg
gcttcgcaggccgttgacggtctggtggacatcatcatccggacggtcaacaagggcgag
aaggtcaacatcaccggcttcggtgtgttcgagaagcgcgcccgcgccgctcgtaccgcg
cgcaacccgcgcaccggtgaggccgtgcgcgtcaagaagaccaacgtgcccgccttccgc
gccggcacgaccttcaaggacgtcatctccggcaccaagaagctgccgaaggccaccccg
gtcaagcgcgccgccgcggcgacgacgacccgcgcgaccgccaccaaggccgccgccgcg
gccccggccaaggccaccaccacccgcaccacgcgggcggccgccgccaagccggccacc
acgcgggcgaccaccacgcgcacccgcgccgccgccgccaagccggccgccaaggccacc
gccaccaaggcggccccgaagaccgcggcgaagaccaccgcggccaaggccaccacggcg
aaggccaccaccacccgcgccaaggccgccgccaagccggccgcgaccaagaccgccgcg
gcgaagaagcccgccgccgccaaggctccggccaagcgcacctccgccgccaagaagaag
tag
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