Amycolatopsis sp. FBCC-B4732: MUY14_39320
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Entry
MUY14_39320 CDS
T08335
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
aprt
Amycolatopsis sp. FBCC-B4732
Brite
KEGG Orthology (KO) [BR:
aprt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aprt03016
]
MUY14_39320
Enzymes [BR:
aprt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MUY14_39320
Transfer RNA biogenesis [BR:
aprt03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MUY14_39320
Prokaryotic type
tRNA splicing ligases
MUY14_39320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UOX87709
LinkDB
All DBs
Position
8702865..8704043
Genome browser
AA seq
392 aa
AA seq
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MYTAVDGARVPIRMWADPASVEEQAMRQLQNVANLPWVHGLAVMPDVHYGKGATVGSVIA
MRDAVSPAAVGVDIGCGMSAVRTSLAASDLPDDLGKLRRRVESAVPVGFGLHKTPVNPAK
VHGVGGWDAFWRGFGELHTGVQELHDRAARQIGSLGGGNHFIEVCLDDDGRVWLMLHSGS
RNIGKELAERHMAVARKLPHNADLPDRDLAVFVAGTPEMAAYRRDLFWAQDYAARNRATM
VALVKQALKDVVPQTTFDDAISCHHNYVSEETYDGVELLVTRKGAIRAGSGDLGIIPGSM
GTGSYIVRGLGNDSSFQSASHGAGRRMSRTKAKKLFTADDLAAQTAGVECRKDSGVVDEI
PAAYKDIDSVIRAQTDLVEVVAHLKQVVCVKG
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgctgtcgacggcgcccgcgtcccgatccggatgtgggcggatcccgcgtcg
gtcgaagagcaggccatgcggcagctgcagaacgtcgccaacctgccgtgggtgcacggg
ctcgccgtgatgcccgacgtgcactacggcaagggagcgaccgtcggcagcgtcatcgcc
atgcgcgacgccgtctcgcccgccgccgtcggggtggacatcgggtgcgggatgagcgcc
gtgcggacgtcgctcgccgcgagcgacctgccggacgacctcggcaagctgcgccggcgc
gtcgaaagcgccgtgccggtggggttcgggctgcacaagacgcccgtcaaccccgcgaag
gtgcacggcgtcggcggctgggacgcgttctggcggggcttcggcgagctgcacaccggc
gtccaggagctgcacgaccgggccgcgcgccagatcgggagcctcgggggcgggaaccac
ttcatcgaggtctgcctcgacgacgacggccgcgtctggctgatgctgcattcgggttcg
cgcaacatcggcaaggagctcgcggagcggcacatggcggtcgcgcgcaagctgccgcac
aacgccgacctgcccgaccgcgacctcgcggtgttcgtcgccggcacgccggagatggcg
gcctaccggcgcgacctgttctgggcgcaggactacgcggcgcgcaaccgggccacgatg
gtcgcgctggtgaagcaggcgctgaaggacgtcgtgccgcagacgacgttcgacgacgcc
atctcctgccaccacaactacgtctcggaggagacgtacgacggtgtcgagctgctcgtc
acccggaagggcgcgatccgcgccggatcgggtgacctcgggatcatcccgggcagcatg
gggaccggttcgtacatcgtccgcgggctcgggaacgactcgtcgttccagtcggcgtcg
cacggcgccggccgccggatgtcccgcaccaaggccaagaagctgttcacggccgacgac
ctcgcggcccagacggccggcgtcgagtgccgcaaggactccggcgtcgtcgacgagatc
ccggccgcgtacaaggacatcgattcggtgatccgggcgcagacggacctggtcgaggtc
gtcgcgcacctcaagcaggtggtctgcgtcaagggctga
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