Amycolatopsis sp. FBCC-B4732: MUY14_39750
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Entry
MUY14_39750 CDS
T08335
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aprt
Amycolatopsis sp. FBCC-B4732
Brite
KEGG Orthology (KO) [BR:
aprt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aprt03032
]
MUY14_39750 (topA)
03400 DNA repair and recombination proteins [BR:
aprt03400
]
MUY14_39750 (topA)
Enzymes [BR:
aprt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MUY14_39750 (topA)
DNA replication proteins [BR:
aprt03032
]
Prokaryotic type
DNA Topoisomerases
MUY14_39750 (topA)
DNA repair and recombination proteins [BR:
aprt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MUY14_39750 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Flg_hook
SBP_bac_3
Toprim_2
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
UOX87787
LinkDB
All DBs
Position
8789414..8792269
Genome browser
AA seq
951 aa
AA seq
DB search
MSGEQDSVAGARTKKNGASADNGAGHRRLVIVESPTKARKIAPYLGGGYVVESSVGHIRD
LPRGAADVPAQYKGESWARLGVDVDNDFKALYVVTPDKKSKVTELKSLLKDVDELYLATD
PDREGEAIAWHLLETLKPKVPVRRMVFHEVTEQAILAAADSTRELDADLVDAQETRRILD
RLYGYEVSPVLWKKVMPKLSAGRVQSVATRIVVERERERMRFTSASYWDISATMDAGEEA
SPRNFAARLVAVDGARLATGRDFGSDGQLKASNNEVRVLVEADARRLAEALKQRDFKVSS
VEEKPYTRKPYAPFMTSTLQQEAGRKMRFTSERTMRIAQKLYENGYITYMRTDSTTLSES
AISAARSQATQLYGKEYVSPSPRQYTRKVKNAQEAHEAIRPSGEVFRTPGQVASELDTDE
YRLYEMIWQRTIASQMADAKGTTMSVRIVGNATSGEECTFAASGRTITFAGFLKAYVEAV
DTETGGEADDKQSRLPVLEKDQALTASDLNPDGHTTSPPARYSEPSLVSKLEELGIGRPS
TYASIIKTIQDRGYVWKKGSALVPSWVAFAVIGLMERHFERLVDYDFTAGMEDELDRIAS
GNEQRAQWLSKFYFGGDMGVDGSIGRLGGLKKLVEGSVEDIDAREINSIPLFSDENGHTV
VVRVGRYGPYLEREVDGNSQRANLPEDLPPDELSREIAEKLFATPQEGRSLGTDPVSGHE
IVAKEGRFGPYVTELLPEVEIPEDATAAQKKAAKAKAPKPRTGSLFKSMDIETIDLDDAL
KLLSLPRVVGKDPESGEEITAQNGRYGPYLKKGTDSRSLSTEDQLFSITVEEALKIYSEP
KQRGRSATAKPPLKELGEDPVSKKPMVVKDGRFGPYVTDGEYNATLRKGDEIESLTAERA
SELLAEKRAKGPAPKRKAPARKPASTTAKTVKAGTTKKATAAKRSTATKTK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagagcaggacagcgtggcaggagcacggacgaagaagaacggagcctcggcg
gacaacggcgccgggcaccggcggctggtcatcgtcgagtcgccgacgaaggcccgcaag
atcgccccctacctgggcggcggttacgtcgtcgagtcctccgtcgggcacatccgcgac
ctgccgcggggcgctgccgacgtccccgcccagtacaagggtgagtcctgggcacgcctc
ggcgtcgacgtcgacaacgacttcaaggccctctacgtggtgactccggacaagaagtcc
aaggtcaccgagctcaagagcctgctcaaggacgtcgacgagctctacctcgcgacggac
cccgaccgcgagggcgaagccatcgcgtggcacctgctcgagacgctgaagccgaaggtc
ccggtccgccggatggtcttccacgaggtcaccgagcaggccatcctcgcggccgccgac
tcgacccgtgagctggacgccgacctcgtcgacgcccaggagacccgccgcatcctcgac
cgcctgtacggctacgaggtctcgccggtgctgtggaagaaggtcatgccgaagctttcg
gcgggccgcgtgcagtccgtggcgacccggatcgtggtcgagcgggagcgtgagcggatg
cgcttcacctcggcgtcctactgggacatctcggcgaccatggacgccggagaggaagct
tcgccgcggaacttcgcggcccggctcgtcgccgtcgacggcgcgcgcctggccaccggc
cgcgacttcggctcggacgggcagctcaaggcgtcgaacaacgaggtccgcgtgctggtc
gaggccgacgcgcggcgtctggccgaagcgctgaagcagcgtgacttcaaggtctcgagc
gtcgaagagaagccgtacacgcggaagccgtacgcgccgttcatgacctcgacgctgcag
caggaggcgggccgcaagatgcggttcacctcggagcgcaccatgcggatcgcgcagaag
ctgtacgagaacggttacatcacttatatgcgtaccgactccacgacgttgtcggagtcg
gcgatctcggccgcgcgcagccaggccacgcagctgtacggcaaggagtacgtctcgccg
tcgccgcgccagtacacgcgcaaggtcaagaacgcgcaggaagcgcacgaggcgatccgg
ccgtcgggggaggtcttccgcacgccgggccaggtcgcgagcgagctggacaccgacgag
taccgcctttacgagatgatctggcagcgcacgatcgcgtcgcagatggcggacgccaag
ggcaccacgatgtccgtgcgcatcgtcggcaacgcgacctcgggcgaggagtgcaccttc
gcggcttcgggccgcacgatcacgttcgcgggcttcctgaaggcgtacgtcgaggcggtg
gacaccgagaccggtggcgaggccgacgacaagcagagccgcctgccggtgctggagaag
gaccaggcgctcaccgcgtcggacctgaacccggacggccacaccacctcgccgccggcg
cggtactcggagccgagcctggtcagcaagctggaagagctgggcatcggccgcccgtcg
acgtacgcgtcgatcatcaagaccatccaggaccgcggctacgtctggaagaagggctcc
gcgctcgtcccgtcgtgggtcgcgttcgccgtgatcggcctgatggaacggcacttcgag
cggctggtcgactacgacttcaccgccggcatggaggacgagctcgaccgcatcgcgtcg
ggcaacgagcagcgcgcgcagtggctgtcgaagttctacttcggcggcgacatgggcgtc
gacggctcgatcggccgcctgggcgggctgaagaagctggtcgagggcagcgtcgaggac
atcgacgcgcgggagatcaactcgatcccgctgttcagcgacgagaacgggcacaccgtc
gtggtccgcgtcggccgctacgggccgtacctggagcgcgaggtcgacggcaactcgcag
cgcgcgaacctgcccgaggacctgccgccggacgagctctcgcgggagatcgcggagaag
ctgttcgcgacgccgcaggaggggcgttcgctgggcaccgacccggtgagcggccacgag
atcgtcgccaaggaaggccgcttcgggccgtacgtcaccgagctgctgccggaagtggag
atccccgaggacgccacggccgcgcagaagaaggccgcgaaggcgaaggcgccgaagccg
cgcacgggctcgctgttcaagtcgatggacatcgagaccatcgacctggacgacgcgctg
aagctgctctcgctgccgcgcgtggtcggcaaggacccggagtccggcgaggagatcacg
gcgcagaacgggcgctacgggccgtacctgaagaagggcacggactcgcggtcgctctcg
accgaggaccagctgttctcgatcaccgtcgaagaagcgctgaagatctactcggagccg
aagcagcgtggccggtcggcgaccgcgaagccgccgctcaaggagctcggcgaagacccg
gtgtcgaagaagccgatggtggtcaaggacggccggttcggcccgtacgtgaccgacggc
gagtacaacgcgaccctgcggaagggcgacgagatcgagtcgctgaccgcggaacgcgcg
tccgagctgctggccgagaagcgggcgaaggggcctgcgccgaagcggaaggcgcccgcg
cggaagccggcctcgaccacggcgaagacggtcaaggcgggcacgaccaagaaggccacc
gcggccaagcggtccaccgcgacgaagacgaagtag
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