Candidatus Azobacteroides pseudotrichonymphae: CFPG_069
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Entry
CFPG_069 CDS
T00792
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aps
Candidatus Azobacteroides pseudotrichonymphae
Pathway
aps03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aps00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFPG_069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aps03021
]
CFPG_069
03400 DNA repair and recombination proteins [BR:
aps03400
]
CFPG_069
Enzymes [BR:
aps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFPG_069
Transcription machinery [BR:
aps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFPG_069
DNA repair and recombination proteins [BR:
aps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFPG_069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BAG83332
UniProt:
B6YQ60
LinkDB
All DBs
Position
complement(92269..93255)
Genome browser
AA seq
328 aa
AA seq
DB search
MAILMFQKPDRVIEVESGDKYGKFEFHPLESGYGITIGNSLRRVLLSSLEGYAITSIKIE
GVSNEFAVVPGVVEDVTNIILKLKQVRFKRINKDFEYERVVLTISETDKFKADDISKRLS
GFEVVNSDFIIAHLDKSANLNIELTIRKGRGYVPSEENYRDSDDVNQIAIDSVFTPIVNV
KYNVESFRVEQKTDYEKLTIEIMTDGSVCPKIALKSASDILIQHLELFSEGRIRLEKDEI
ETVKDFDEDVLRIRQLLKSKLSDMELSVRALNCLKAEAIETLEDLVKYQKSDLMKFRNFG
KKSLVELDELLAKLNLTFGMDIEKYKFG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattaatgtttcaaaaacctgatagagtaatagaggtagaatccggtgataag
tatggaaaatttgaattccatccattggaatcaggttatgggatcactattggtaattct
cttcgtcgtgttcttttatcatctttagaaggttatgccatcacttcaattaagattgaa
ggtgtgagtaatgaatttgctgttgtaccaggagttgtagaagatgttacgaacataatt
cttaaacttaaacaagtgaggtttaaacggataaacaaagattttgaatatgagagagtg
gtccttactatttcagaaactgataaattcaaggcagatgatattagtaaacgtttaagt
ggattcgaagtagtgaattctgattttataatagctcatttggataaaagtgctaatctt
aatatagagttgacaattagaaaagggcgagggtatgttccatcagaagagaactataga
gatagtgatgatgtaaaccagatagctattgattctgtttttacaccgatagtaaatgta
aagtataatgttgagtcttttcgtgtggagcaaaagacagattatgaaaaattgacgatt
gaaattatgactgatggttctgtttgtcctaaaattgctttaaaatcagcttctgacatt
ttgatccaacatttggaattattttctgaagggagaattcgattagaaaaggatgagatt
gaaacagttaaagattttgatgaagatgtcttacgcatacgacagctattgaaatctaaa
ttatcagatatggaactttctgttcgtgccctcaattgtttgaaagcagaggcaatagaa
acattggaggatcttgtaaagtatcaaaaaagtgatttaatgaaattccgtaattttggt
aagaagtcgctagtcgaattagatgagttgttagcaaaattgaatttaacatttggtatg
gacatagaaaaatataaatttgggtag
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