Candidatus Azobacteroides pseudotrichonymphae: CFPG_115
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Entry
CFPG_115 CDS
T00792
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
aps
Candidatus Azobacteroides pseudotrichonymphae
Brite
KEGG Orthology (KO) [BR:
aps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aps03009
]
CFPG_115
Enzymes [BR:
aps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CFPG_115
Ribosome biogenesis [BR:
aps03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CFPG_115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Casc1_N
Motif
Other DBs
NCBI-ProteinID:
BAG83378
UniProt:
B6YQA6
LinkDB
All DBs
Position
134250..135278
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AA seq
342 aa
AA seq
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MGNKLNEHFRFVANKEQGFLRVDKFLVDKIIGTSRNRIQQAANVGSICANNHPIKSNYKV
KPGDIITIVMNQPHREVEIAPENIPLNIVYEDDDVIVVDKPAELVVHPGHDNYTGTLVNA
IAGYYSSTTSSIIQSTFYNEDFRSGLVHRIDKGTSGLLVFAKNLNAKTNLDMQFFRKTIR
RNYWAVVWGNVKKEEETIKCNIGRNLHNRMLMDVFPNNNHGKPAITHYKVLERFEYVTLI
ECSLETGRTHQIRVHMKYIGHVLFNDRRYGGNEILKGNHHTKYKQFVQNCFAICQRQALH
ARVLGFTHPKTGKEILLESPLPKDMILLIERWRNFSKNLNKP
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgggaaataaattaaatgaacattttcgttttgtcgccaacaaagaacaaggtttttta
agagtagataaatttttagtcgacaaaattataggtacttctcgcaatcgtattcaacaa
gctgctaatgtaggttctatttgtgccaacaaccacccaataaaatctaattacaaagta
aaacccggggatataataaccattgtaatgaatcagcctcatagagaggtggaaattgct
ccagaaaatatccctctaaacattgtttatgaagacgatgacgtaatagtagtagataag
cctgccgaattagttgtacatccaggtcatgataattatactgggacattagttaatgct
attgctggatattattcatcaaccactagtagtataatacaatctactttttataatgaa
gatttccgatcaggactagtacatagaatagacaagggtacttctggcttattagttttt
gctaaaaatcttaatgctaaaacaaatttagatatgcaattttttcgtaaaactattcgg
agaaattattgggcggtagtgtggggcaatgtaaaaaaagaagaagagactataaagtgt
aatatcggacgcaatttgcataatagaatgttaatggatgtttttccaaataataaccat
ggtaaaccagcaattacacattataaggtactagagagatttgaatatgtaactttgatt
gaatgtagtctagaaactggacgtactcaccaaattcgtgttcatatgaaatatattggt
cacgtattatttaacgatagacgttatggaggtaatgaaatactaaaaggtaatcatcat
acaaaatataagcagtttgttcaaaattgtttcgctatatgccaacgtcaggctttacat
gctcgagtattaggattcacccatcccaaaacaggtaaagaaatccttttagaaagtcct
ttaccaaaagacatgatactattgattgaaaggtggagaaacttttctaaaaatttgaat
aaaccatga
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