| Entry |
|
|---|
| Name |
(GenBank) excinuclease ABC subunit A
|
|---|
| KO |
| K03701 | excinuclease ABC subunit A |
|
|---|
| Organism |
aps Candidatus Azobacteroides pseudotrichonymphae
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:aps00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFPG_372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:aps03400]
CFPG_372
DNA repair and recombination proteins [BR:aps03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFPG_372
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFPG_372
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
528943..531714
|
|---|
| AA seq |
923 aa
MTLESNIVIKGARVNNLKNIDVEIPLNKFTVITGLSGSGKSSLAFDTLYAEGRRRYVESL
STYARQFFGKISKPEVDFIKGLPPAIAIGQKVNTHNSRSTVGTSTEIYNYLCMLFARIGK
TISPITGKIVYKHQTSDVIDEMSHYPNGTRIVLLTQIIPTASHSIEKQLSILIQEGFSRI
EIDGEIYHIGEILGDKILSRNVYLVIDRFIINNDLKAVSRFSDSIETAFLKGNDSCVLHV
YTKQGIISKEFSRRFEDNGIEFEEPSDRMFNYNSPIGACPTCEGLGIILGISEKSVIPDT
SLSIYDDAIVCWKGDKMSEWKQGFIKKSSYYKFPIYRPYKELTQEEKDLLWHGNGSLHGI
NDFFKYVEENLYKIQYRVMYARYRGKTTCPVCKGKRLKHQALYVKIGEKNITDLMTMSVN
KVKFFFENLQLTKYDAQIAKRLLIEIDSRLQFLNDVGLGYLTLDRLSSTLSGGESQRINL
ITALGNNLVGSLYILDEPSIGLHSKDTTLLIRALRKLQALGNTVIVVEHDERIICSADYI
IDMGPKAGRNGGEIIYRGKIDELDIASESHTVRFLTGKEIIEVPVQRRKWNNFIEIKNAR
KNNLKGFDVRFPLNVMTVVTGVSGSGKSSLVCDVFYQELKQFYESNRETKSVFGDLCLIE
CIEFIDQSSIGRSTRSNPVTYIKAYDEIRKLFAGQPLAKQLNFTSSYFSFNIKGGRCEEC
KGEGTITVEMQFMADVILKCETCQGKRFKQDILDIEYHNKNIYDVLNMTIDEAIDFFKER
EDNTTKKIIHRMQILHEVGLGYVKLGQSSATLSGGENQRLKLAYHLVEDKKHPTLFIFDE
PTTGLHFFDIKTLIHAFNELITYGHTIVIIEHNMDIIKTADYIIDLGPEGGENGGYLIGT
GTPEEITKNRESVTGKFLKAKLY |
|---|
| NT seq |
2772 nt +upstreamnt +downstreamnt
atgacattggaatccaatattgtcattaaaggagcaagagtcaataatcttaaaaatatc
gatgtagaaatcccccttaataagtttactgtaattacaggactatccggatcaggaaaa
tcatctttagctttcgatactttgtatgcagaaggacgaagacgttatgtagagagtctt
tctacttatgctcgtcaattttttggtaaaataagcaaacctgaagtagactttattaaa
ggactacctccagctattgctattgggcaaaaagtaaatactcataattcgcgcagtact
gtaggtacttctactgaaatctacaattatttgtgtatgctgtttgctcgcattggtaaa
actatttcgccaattactggaaaaatagtatacaaacatcaaacaagcgatgtaatagat
gaaatgtcccattatccaaatgggacacgcattgttttactcactcaaataattccgaca
gcgtctcattccatagaaaaacaattgagtatattaattcaagagggattttcaaggata
gaaattgatggtgaaatttatcatataggggaaatactcggagacaagatattatcacgt
aatgtttatttagtgatagatcgattcattattaataatgacttgaaggctgtttcccgc
ttttctgattcgatagaaaccgcttttttaaaagggaatgatagttgtgttcttcatgtt
tatacaaaacaaggtattatttcaaaagagttttcacgaagatttgaagataatggaatt
gaatttgaggaaccttcagatagaatgtttaattataatagtccaataggtgcttgtccg
acatgcgaaggattgggaataattttaggaatatcagaaaaatcagtcattccggacacc
tctttatctatatatgatgatgctatagtttgctggaaaggagataaaatgagtgaatgg
aaacaggggtttattaaaaaatcttcttattacaaatttcctatttatcgcccttacaaa
gaattgacacaagaagaaaaggacttgttgtggcatgggaatggatcgttacatggaatt
aacgatttcttcaaatatgtagaagaaaacttgtataaaatccaatatagagtcatgtac
gctcgttatagaggcaaaactacatgtccagtttgtaaagggaaacgattaaagcatcaa
gccctatatgtaaaaattggagagaaaaacattactgatttaatgactatgtctgtcaat
aaagttaaattcttttttgaaaatcttcaattaaccaaatatgatgctcaaattgccaag
cgacttctgattgaaattgattctcgattacaatttttaaacgatgtaggattgggatat
ttgacattggatagattgtcatcaacattatctggaggtgaaagtcagcgcattaactta
ataacagcactagggaataacctggtaggttctctatatattttagacgaaccgagcatt
ggtttgcactcaaaagatacaactttgttaattagagctctgcggaagttacaagcatta
gggaatacagtaatagtggtggagcatgacgagagaatcatttgttcggcagactatatt
atagatatgggtcctaaagcaggcaggaatggaggagaaataatttatagaggaaaaatt
gatgaattggatatagcttctgaaagccatacagttcgttttcttactggaaaagaaata
attgaagtgcctgtacagcgcagaaaatggaataattttattgaaataaagaatgctcgg
aaaaacaatttaaagggatttgatgtacgattcccattgaatgttatgacagtagttact
ggggtaagtggttcaggcaaatcctctttggtatgtgatgtgttttatcaagaattaaaa
caattttatgaaagtaacagggagacaaaaagtgttttcggggatttatgtcttatagaa
tgtatagaatttatagaccaaagttctattggacgttctacacgttccaatcctgtaacc
tatattaaagcttacgatgaaatacgcaaactttttgctggacagcctttagcaaaacaa
ttaaactttacttcatcttatttttcatttaacataaaaggtggtaggtgtgaagaatgt
aaaggtgaaggcacgatcacagttgagatgcaattcatggctgatgtaattttgaaatgt
gaaacatgtcaaggtaaacgatttaaacaagatatcttagatatagaatatcataataaa
aatatttatgacgttcttaatatgactattgatgaagcaattgatttttttaaggaaaga
gaagacaacacgacgaaaaagattattcatagaatgcagattttacatgaagtaggatta
ggctacgttaagcttggacaaagttctgctaccctttcgggtggagaaaatcaacggctg
aaactagcttatcatcttgtcgaagataaaaaacacccaactttatttattttcgatgaa
ccaactactggacttcatttttttgatatcaagacactaatacatgctttcaatgagttg
attacttatggacatacgattgtgatcatagaacataatatggatattatcaaaactgct
gactatatcattgatttaggaccagagggaggagaaaacggtggctatttaattggtacg
gggactcctgaggaaattactaaaaatagagaatctgttacagggaaatttttgaaagca
aaattatattag |
|---|
