Candidatus Azobacteroides pseudotrichonymphae: CFPG_397
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Entry
CFPG_397 CDS
T00792
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
aps
Candidatus Azobacteroides pseudotrichonymphae
Pathway
aps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CFPG_397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aps03400
]
CFPG_397
DNA repair and recombination proteins [BR:
aps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFPG_397
RecFOR pathway proteins
CFPG_397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
TMEM37
Ribosomal_S13
HHH_8
HHH_3
HHH_6
DUF5388
Motif
Other DBs
NCBI-ProteinID:
BAG83660
UniProt:
B6YR38
LinkDB
All DBs
Position
562651..563241
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AA seq
196 aa
AA seq
DB search
MLDFIKGEIVELIPDSVIIETGNIGYMLFISLNTYFSLTKIKSCKLYIYEVIREETHQLF
GFIDKKERQLFTHLISVPGVGANIARMVLSSLSVCELEEIIFSGNVSALQALKGIGNKTA
ERIIIDLKDKVKPDNIPSSDTIITNISSNITKEAITALITLGFSQSASQKVVNKIVSNNS
SSTTIEQIIKKALKLL
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgttagattttattaaaggtgaaattgttgaattaattcctgattcagtaataattgaa
acaggtaatataggttatatgcttttcatttcattaaatacctatttttcacttactaag
ataaaaagctgtaagctatatatttatgaagttatcagagaggaaactcatcaacttttt
ggttttatagacaaaaaagagagacaattatttactcatcttatttcagtacctggtgta
ggagcaaatattgcacgcatggttttatcatccttatctgtttgtgaattggaagaaatt
attttttctgggaatgtatcggctttgcaggcactaaaaggtattggaaacaaaactgct
gaaagaattatcattgatttaaaagataaagtaaaacctgacaatattccttctagtgat
actattatcacaaacatttcttctaatattactaaagaagctattactgcattgattacg
ttgggattcagtcaatcggcctcacaaaaagtggtcaataaaattgtaagtaataattca
agttctacaacaatagaacaaatcattaaaaaagcgttaaaattattgtaa
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