KEGG   Acinetobacter pseudolwoffii: LDO52_11605
Entry
LDO52_11605       CDS       T11914                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
apse  Acinetobacter pseudolwoffii
Pathway
apse03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apse00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LDO52_11605 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apse03021]
    LDO52_11605 (rho)
   03019 Messenger RNA biogenesis [BR:apse03019]
    LDO52_11605 (rho)
Transcription machinery [BR:apse03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     LDO52_11605 (rho)
Messenger RNA biogenesis [BR:apse03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     LDO52_11605 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_25 AAA_22 S1CSD-TOTE-2 OB_RNB AAA GpA_ATPase
Other DBs
NCBI-ProteinID: UBX51949
LinkDB
Position
2400352..2401620
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTTRVIDLVAPIGKGQRSIIVAPP
KAGKTMLLQSIAQSIVRNNPEAILIVLLIDERPEEVTEMERTVRGEVVASTFDESPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDEVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMSEDNLRKVWILRKLLHTQDELAAMEFLLDRMKETKTNDDFFDQMKRKA
SN
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaatttaaccgaactcaagaaaaaaccgattggcgaactcatcaagattgccgagttt
atgggccttgaaggtatggctcgtaaccgtaagcaagacattatttttgccatcttaaaa
cgtcatgcaatgaatggcgaagagatttttggtgatggcgttctagaaattttgtcagat
ggttttggctttttacgctcagccgcaggttcttatttagcaggccctgacgatatctat
gtcagtccttctcaaattcgtcgttttaacctacgtactggcgacaccattactggcact
attcgtccaccaaaagaaggcgaacgttattttgccttacttaaagttaatcagattaac
tacgacacccctgaaaattcacgtaataaaatcttattcgaaaacttgaccccattgttc
ccgactgaacagctggtgatggaactcggtaatggtaccactgaagatttaaccacacgt
gtgatcgacttggtggcaccgattggtaaaggtcaacgttcaatcattgtggcaccgcca
aaagccggtaaaaccatgttgctgcaaagtattgcgcaatcgattgttcgtaataaccca
gaagctattctgattgtgcttctcattgatgaacgtccagaagaagtcaccgaaatggaa
cgtaccgttcgcggtgaagtggttgcgtcgacctttgatgaatcacctgcacgtcatgtt
caagtcgctgaaatggtgattgaaaaagccaaacgtctggttgagcacaaaaaagatgtg
gtgattctactggattcgattacccgtctggcacgtgcgtataacacggtgattccttca
tcaggcaaggttttgactggtggtgtagatgcgcatgcattagaacgtcctaaacgtttc
ttcggtgctgcacgtaatattgaagaaggtggttcactcaccattatctctactgccctg
attgaaacaggcagcaagatggatgaagtgatctacgaagaattcaaaggtacaggcaac
caggaaattactctggatcgccgtattgctgaaaaacgtgtcttccctgcgatgaatatc
aagaaatctggtactcgccgtgaagaacgcctgatgtcagaagacaatctgcgcaaagtc
tggattctgcgtaagctgctgcatactcaagatgaattggcagcgatggagttcttactg
gatcgtatgaaagaaaccaagaccaatgatgacttctttgatcagatgaaacgcaaagcc
tcgaattaa

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