Acetobacter pasteurianus IFO 3283-01: APA01_06440
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Entry
APA01_06440 CDS
T00988
Symbol
rpoK
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
apt
Acetobacter pasteurianus IFO 3283-01
Pathway
apt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
APA01_06440 (rpoK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apt03021
]
APA01_06440 (rpoK)
03400 DNA repair and recombination proteins [BR:
apt03400
]
APA01_06440 (rpoK)
Enzymes [BR:
apt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
APA01_06440 (rpoK)
Transcription machinery [BR:
apt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
APA01_06440 (rpoK)
DNA repair and recombination proteins [BR:
apt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
APA01_06440 (rpoK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BAH98793
UniProt:
C7JDZ9
LinkDB
All DBs
Position
669651..670022
Genome browser
AA seq
123 aa
AA seq
DB search
MARVTVEDCVEKVPNRFELVVYAAQRARNISRGEELTVDRDNDKNPVVALREIADETVSL
PALRNDLIRSQAREPEPEPVEEEVQDLVPTEQNIFGLQEVSAEEEAADDVRAIEAALTGR
ARR
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcaccgttgaagactgtgtggaaaaggtcccgaaccgttttgaactggtg
gtctatgccgcacagcgtgcccgcaatatctcccgcggggaagagctgacagttgatcgg
gataacgataaaaaccccgttgttgctctgcgtgaaattgcagacgaaaccgtctctctg
cccgctctgcgcaatgatctgatccgttctcaggcccgtgaacccgagcccgaacccgtg
gaagaagaagtgcaggatctggttcccaccgagcagaacatctttggcttgcaggaagtt
tctgcagaagaagaagctgctgatgatgtgcgggctattgaagctgcacttaccggtcgc
gcacgtcggtaa
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