Acetobacter pasteurianus IFO 3283-01: APA01_24690
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Entry
APA01_24690 CDS
T00988
Name
(GenBank) DNA/RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
apt
Acetobacter pasteurianus IFO 3283-01
Pathway
apt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APA01_24690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apt03019
]
APA01_24690
03009 Ribosome biogenesis [BR:
apt03009
]
APA01_24690
Enzymes [BR:
apt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
APA01_24690
Messenger RNA biogenesis [BR:
apt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
APA01_24690
Ribosome biogenesis [BR:
apt03009
]
Prokaryotic type
rRNA helicases
APA01_24690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAI00576
UniProt:
C7JG06
LinkDB
All DBs
Position
2677650..2679410
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AA seq
586 aa
AA seq
DB search
MPFQNAPAPLARALAARGFTAPTAVQAAVLADDAKNRDLLVSARTGSGKTVAFGLTLADL
LLNDAGRCVPSGAPIALVIAPTRELALQVRSELEWLYAETGARIVSCVGGMEPRKEARAL
ASGCHIVVGTPGRLCDHLRRGALDLSHLKAVVLDEADEMLDLGFRDELETLLDAMPKERR
TLLFSATIARDIAALARRYQQDALRIDTVGTNTPHADITYRAVLTEQGDMAGTVVNVLRL
MESSAAIVFCHTREAVRQLQAILTERGFSSVAISGDLGQNERSRAIESLRHGQARVCVAT
DVAARGIDIPDLGLVIHASLPSNPATLLHRSGRTGRAGKKGTCVLLVPPARRRLAERLLQ
AAKVTAEWSGAPTPAAIATADAERLLGAPFLSAPAPEDAETQTLIGRLVAEHTPEQLAAA
LVGLWHKSLPAPVSVRVITPDARRAPRERDPNRPVRERERAPAMDGKWFRLSVGREDRAD
PKWLVPMLCRLGNIKKQDIGSIRITQDHTLVEISPDKAEQFASCASATDPDEITVEPAAA
PRKGGGGGGGGPRPAYADRKPKGGRSFAPRREGPSKNGSSRKRKSK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgccttttcagaatgctcctgcccctctcgctcgtgctcttgctgcacgtggctttact
gctcctaccgctgttcaggccgccgttctggccgatgatgccaaaaatcgcgacctgctg
gtttcagcccgcaccggatctggcaaaactgttgctttcggcctgacgctggctgacctg
ctgctgaatgatgcaggccgctgcgtgccgtctggcgcacctatcgctctggttattgcc
cccacgcgtgaacttgccttgcaggtgcgtagtgagctggaatggctgtatgccgaaacc
ggtgcacgcattgtttcctgcgttggtggcatggaaccccgcaaggaagcccgagccctt
gcctctggctgccacattgttgtgggcacaccgggccgcctgtgtgaccatctgcgccgc
ggtgcgcttgatctttcacacctgaaagccgtggtgctggatgaagcagatgaaatgctt
gatctgggcttccgtgatgagctggaaaccctgctggacgccatgcccaaagagcggcgc
accctgctgttttccgcaaccattgcacgcgatattgcagcccttgcacgccgctatcag
caggatgccctgcgcattgatacggtagggacaaataccccccacgccgatattacctac
cgcgctgttctgacagaacaaggcgatatggctggcacggttgtaaacgtgctgcgcctg
atggaatcctccgctgctatcgtgttctgccatacgcgtgaagctgtgcgccagttgcag
gcgattctgacagaacgcggtttttcctccgtcgccatttcaggtgatctggggcagaac
gaacgtagccgcgccatagaaagcctgcgccacggccaagcccgcgtgtgcgtagcaaca
gacgtagccgcccgcggtattgatattccggatctggggctggttatccatgccagcctg
ccctccaacccagctaccttgctgcatcgttccggccgtacaggccgtgcaggcaaaaaa
ggtacctgtgtgttgctggtgccaccagcacgcagaagattggcagaacgcctgcttcaa
gctgccaaggtcaccgcagaatggagtggtgcccctaccccggctgccattgccacagcc
gatgccgaacgccttttgggtgctccattcctttctgctccggcacctgaagatgcagaa
acacaaacgctgatcggtcgccttgttgctgaacacacgccagaacagctggctgcagca
cttgttggcctatggcataaaagcctgcctgcgcctgtttctgtacgcgtcatcactcca
gatgctcgtcgtgccccgcgggaacgtgatccaaaccgccctgtgcgcgaaagagaacgt
gcacctgcgatggatggcaaatggttccgcctttctgttggccgtgaagatcgggcagac
cccaaatggctggtgcccatgctgtgccgcttggggaacattaaaaagcaggatatcggc
tctatccgtattacgcaggaccacacactggttgaaatttctcccgataaagccgagcag
tttgcgtcttgcgcctctgccacggacccggatgaaattacagtggaaccagcagcagca
ccccgcaaaggtggcggtggtggtggtggcggacctcgccctgcttatgctgatcggaaa
cccaaaggtggccgttcttttgcgcctcgtcgggaaggccctagcaaaaacggttcttcc
cgcaagcgtaagtcaaaataa
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