Acetobacter pasteurianus IFO 3283-07: APA07_10450
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Entry
APA07_10450 CDS
T01813
Symbol
uvrD_rep
Name
(GenBank) DNA helicase II UvrD/Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apu
Acetobacter pasteurianus IFO 3283-07
Pathway
apu03420
Nucleotide excision repair
apu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APA07_10450 (uvrD_rep)
03430 Mismatch repair
APA07_10450 (uvrD_rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apu03400
]
APA07_10450 (uvrD_rep)
Enzymes [BR:
apu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APA07_10450 (uvrD_rep)
DNA repair and recombination proteins [BR:
apu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APA07_10450 (uvrD_rep)
MMR (mismatch excision repair)
Other MMR factors
APA07_10450 (uvrD_rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_22
Tudor_1_RapA
DUF3553
Motif
Other DBs
NCBI-ProteinID:
BAI05293
LinkDB
All DBs
Position
complement(1100010..1102241)
Genome browser
AA seq
743 aa
AA seq
DB search
MVNTSEHPSAPLFSSPSASGDNYLARLNPEQRAAIETTDGPLLVLAGAGTGKTRVLTTRF
AHILLTGRAKPWQILTVTFTNKAAREMRERIGLLLGSPAEGLWLGTFHALCARMLRRHAE
YVGLTQSFTILDTDDQLRLLKQVMAPWQIDIKRWPAPGLLGVIQRWKDRGLTPERITPTE
DSDFANGHARAIYTAYQVRLKQLNACDFGDLMLHVTEILRTRPDVLAQYHRLFRYILVDE
YQDTNTIQYLWLRLLAKHAEGPANICCVGDDDQSIYSWRGAEVENILRFEKDFPSAKVVR
LERNYRSTRHILGAAAGLIAHNSERLGKTLRPGREDAEGKKVSVLGVWDSDTEARMVCEQ
AEKLRAQGHALKEIAILVRAGFQTRAFEERLMQTGLPYRIVGGLRFYERAEIRDALAYMR
VLSQPADDLAFERIINVPKRGVGPAGLQKLHAAARANNLPLTGGTEKLLEDNALKGKSAA
HLRQLMEAFASTRDILAREGHVVAVEHLLEESGYMDMWRQDRSPDAPGRLENLKELTRAL
ADFGTLGEFLEHVALVMDHDENGQDDYLSIMTLHGAKGLEFDTVFLPGWEEGVFPSQRTL
DEGGLKGLEEERRLAYVGITRARQEAIIFHAGRRRIYANWQPSMPSRFLEELPDEHVVRH
DEGGGFQRQGLNLSESVFDNGPIIARRRKDPMLEAAPALQLGDHVRHPRFGEGVVISADR
HHVEVSFESVGTKRLLSSFIEKI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatacgtccgaacacccctccgccccgcttttttcatctccgtctgcctcgggt
gacaattatctggctcgtctcaaccccgaacagcgcgctgctattgaaacaacggatggc
cctttgctggtactggctggtgctggcacaggcaaaacacgggttttaaccacccgcttt
gcgcatatcctgcttacaggccgcgccaagccgtggcagatcctgacagtaacctttacc
aacaaagccgcgcgcgaaatgcgtgagcgtatcggcctgcttttgggcagcccggcagaa
gggttatggttaggcacatttcatgccctgtgcgcgcgcatgctccgccgccatgctgaa
tacgtggggctgacacaaagctttaccattctggatacggatgaccagttgcgcttgctc
aagcaggttatggcgccgtggcagattgatatcaaacgctggcctgctccgggccttttg
ggcgtgatccagcgctggaaagaccgtgggcttacgccagaacgcattacccccaccgag
gattcggattttgccaatggccatgcccgcgccatttacaccgcctatcaggtccgcctg
aagcagctgaacgcctgcgattttggggatctgatgctgcatgtcaccgaaattttgcgc
acacggcctgatgtgctggcccagtatcatcgcctgttccgctacattctggtggacgag
tatcaggataccaacaccattcagtacctttggctgcgcctgctggccaaacatgcagaa
ggtcctgccaatatctgctgcgtgggggatgatgaccagtccatctactcatggcgcggc
gcagaagttgaaaatattctgcggtttgaaaaagattttccctccgccaaggttgtgagg
ctggaacgcaattatcgctccacccggcatattctgggcgcggcggcagggcttattgcc
cataacagtgaacgcttgggcaaaacactccgccccggccgagaagatgcagaaggcaaa
aaagttagcgttctcggggtgtgggattcggatacagaagcccgcatggtgtgcgaacag
gctgaaaaactgcgcgcacaaggccacgccctaaaggaaattgccattctggtgcgggcg
ggctttcaaacccgcgcgtttgaagaacggttgatgcaaacaggcttaccttaccgcatt
gtgggcggcctgcggttttatgagcgcgcagaaatacgtgatgcactggcctatatgcgc
gtactcagccagcccgcggatgatctggcttttgaacgcattatcaacgtgcccaaacgc
ggcgttggccctgctgggctacaaaagctgcacgctgcggcccgcgctaataacctgccc
cttacaggcggcacggaaaagctgctggaagataacgcgcttaaaggaaaatccgccgcc
catttgcgccagctcatggaagcctttgccagcacgcgcgatattctggcgcgtgaaggg
catgtggtagccgtagaacacctgctggaagaaagcgggtatatggacatgtggcggcag
gatcgctcccccgatgcgccggggcggttggaaaacctgaaagaacttacgcgcgcactg
gccgattttggaacgctgggcgagtttctggaacacgttgcccttgtcatggatcatgat
gaaaacgggcaggatgattacctgtccatcatgacgctgcacggcgccaaggggctggag
ttcgacacagtattcctgcccggctgggaggaaggcgttttcccctcccaacgcacactg
gatgaaggcggcctgaaagggctggaggaagaacgcaggctggcttacgtgggcattacg
cgcgcacggcaggaagccattatctttcatgcgggccgcaggcgtatttacgccaactgg
cagccttccatgcccagccgctttctggaagaactgccagatgaacacgtagtccgccat
gatgaaggtggcggcttccagcggcagggcctcaacctttccgaatccgtgtttgataac
ggccccattattgcccgccgcagaaaagaccccatgctggaagccgcaccggccctgcaa
ctgggagaccatgtgcgccacccccgctttggggagggcgtcgttatttcggcagatcgg
caccatgttgaagtgtcttttgaatctgtcggcaccaaacgtcttctttcatcctttatc
gagaaaatctaa
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