Augochlora pura: 144467756
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Entry
144467756 CDS
T11608
Symbol
Mrn
Name
(RefSeq) general transcription factor IIH subunit 4 marionette isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
apur Augochlora pura
Pathway
apur03022
Basal transcription factors
apur03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apur00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
144467756 (Mrn)
09124 Replication and repair
03420 Nucleotide excision repair
144467756 (Mrn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apur03021
]
144467756 (Mrn)
03400 DNA repair and recombination proteins [BR:
apur03400
]
144467756 (Mrn)
Transcription machinery [BR:
apur03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
144467756 (Mrn)
DNA repair and recombination proteins [BR:
apur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
144467756 (Mrn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
144467756
NCBI-ProteinID:
XP_078032813
LinkDB
All DBs
Position
3:21380846..21384077
Genome browser
AA seq
467 aa
AA seq
DB search
MSSTITGKNLLRPTGLQSKNLQEYLKSRPPEILNKLYHNPPICLAVFRELPVIAKHYVMR
LLFVEQPVPQAVIASWCSKLYFEEHQKVVSILNELNVWKEVSIPGGLPGWILNATFKKNL
KIVLLGGGKPWTMSNQMETDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEADGSPVITQAGFQFLLLETASQVWYFILQYLDTIEARGLDLVECLTFLF
QLNFSTLGKDYSTEGMSEGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNKPL
SRDPEKEGYIVVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNLVVSILTRDSVRQALKS
GITATQIVGYLQQHAHSKMIEAGPPVLPPTIVDQIKLWENERNRFIFSEGVLYSQFLSQT
DFEVLRDHALSTGVLIWQSERKRTMVVTKAGHDDVKKFWKRYSKGSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtacaataaccgggaagaatttgttacgacccactggactgcaatctaagaat
cttcaagaatatttaaaatcacgacctccggaaatattgaataaactctatcacaatcct
ccaatttgtttagctgtctttcgtgaattgcccgtaatagctaagcactatgtcatgcga
ttattatttgtcgaacaaccagtacctcaagcagtcattgcttcttggtgttctaaactt
tactttgaggaacatcagaaggtagtgtcaatattaaacgaattgaatgtgtggaaggaa
gtttccataccaggaggattacctggatggattcttaatgctacatttaaaaaaaatcta
aaaattgttttactgggtggtggaaaaccatggaccatgtcaaatcaaatggaaaccgat
agtaaaccaagagacgtagcatttttagattcatatgcgttggaaagatgggaatgtgtc
ttgcactatatggttggttcacaacaacaagaaggtatttctgctgatgccgtcagaata
cttttgcatgctggattaatgaaacgagatgaagctgatggaagtccagttattacacaa
gctgggtttcaatttctgttattagaaactgcatcgcaggtgtggtacttcattttacaa
tatttagacacaatagaagcaagaggtctcgatttagttgaatgtcttacatttctcttt
caattaaatttttctacacttggtaaggattatagtactgaaggaatgtctgagggttta
ctaacatttttacaacatttacgcgaatttggcctagtttatcaaaggaaacgaaaagct
ggaagattttatcctacacgattagcattaaatattgctactggacaaaacaaaccatta
tctagggatccagaaaaagaaggttatattgttgttgaaacaaattacagagtatatgct
tatacaaattcaaatttacaagttgccttactcggtctgttctgtgaaatgttgtacagg
tttccaaatttggtcgtatcaatattaacaagagactctgttcgtcaagctttaaaaagt
ggtatcacagcaactcaaattgtaggttatttgcagcaacatgctcacagtaaaatgata
gaggcaggtcctccagttttaccacctacaattgtagatcaaattaaattgtgggaaaat
gaaagaaacaggtttatatttagcgaaggggttttatatagtcaatttctttctcagact
gattttgaagtacttagagatcatgccctttctactggagtattaatttggcaaagtgaa
agaaaacgaaccatggtagttacaaaggcaggacacgacgatgtgaaaaaattctggaaa
cgatattccaaaggttccagttag
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