Augochlora pura: 144469976
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Entry
144469976 CDS
T11608
Symbol
Hel25e
Name
(RefSeq) ATP-dependent RNA helicase 25E
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
apur Augochlora pura
Pathway
apur03013
Nucleocytoplasmic transport
apur03015
mRNA surveillance pathway
apur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
144469976 (Hel25e)
09122 Translation
03013 Nucleocytoplasmic transport
144469976 (Hel25e)
03015 mRNA surveillance pathway
144469976 (Hel25e)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apur03019
]
144469976 (Hel25e)
03041 Spliceosome [BR:
apur03041
]
144469976 (Hel25e)
Enzymes [BR:
apur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
144469976 (Hel25e)
Messenger RNA biogenesis [BR:
apur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
144469976 (Hel25e)
Spliceosome [BR:
apur03041
]
Complex C
Other components
EJC/TREX
144469976 (Hel25e)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
144469976 (Hel25e)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
144469976
NCBI-ProteinID:
XP_078036855
LinkDB
All DBs
Position
5:complement(18021511..18026976)
Genome browser
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQVVDGSGDIPSKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHSKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaatgatgatcttttggattatgaagatgaggaacagactgaacaagtagtc
gatggaagtggggatatacccagtaagaaagaggttaaaggaacatacgtatctattcac
agtagcgggtttagagattttcttcttaaacctgaaatattacgtgcaattgttgattgt
ggtttcgaacatccttctgaagtacaacacgagtgcattcctcaggcagtgcttggtatg
gatatattatgccaagcaaaatctggtatgggaaagactgcagtatttgtattagctacg
ttgcaacaattggaattaacagagaaccaagtttacgttcttgtaatgtgccacacaaga
gaacttgcttttcaaattagcaaagaatatgaaagatttagcaaatatatgcctcatgta
aaggtaggcgtatttttcggcggtttaccaattcaaaaggatgaagaagttttgaagaac
acatgtcctcatattgttgtgggaactcctggccgtatcctcgctcttgtacgaaataag
aaattgaacctgaagcatctgaaacattttatacttgacgagtgcgataaaatgcttgaa
ctcctagacatgcgtagggatgtacaggaaatatttagaagcacaccacacagcaagcaa
gtaatgatgttcagcgctacgttatccaaggagatacgtcctgtctgcaagaaatttatg
caagatcccatggaagtctatgtggacgatgaagctaaacttacattgcacggtctacaa
cagcattacgtgaaactaaaggagaatgaaaagaataagaagctgtttgagttactagac
gttcttgaattcaatcaggttgttatctttgtaaaatctgtacaaaggtgtatggctttg
gcacaacttttaacagaacaaaacttccctgctattgggatacacagaggcatgacacaa
gaagaacgattatccagatatcagcaattcaaagacttccagaaacgaattcttgtagct
actaacttattcggacgcggtatggatattgaacgtgtaaacatagtatttaattatgac
atgccagaagattcagacacatatctacatagagtggctagagctggacgtttcggtaca
aagggattggctattacattagtaagtgacgaaagcgatgcaaaaatattgaatgacgtg
caagaaagattcgatgtaaatattacagagttgccggacgagatagatctagcttcatac
atcgaaggacgataa
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