Augochlora pura: 144471364
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Entry
144471364 CDS
T11608
Symbol
Clp
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
apur Augochlora pura
Pathway
apur03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apur00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
144471364 (Clp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apur03021
]
144471364 (Clp)
03019 Messenger RNA biogenesis [BR:
apur03019
]
144471364 (Clp)
Transcription machinery [BR:
apur03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
144471364 (Clp)
Messenger RNA biogenesis [BR:
apur03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
144471364 (Clp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
144471364
NCBI-ProteinID:
XP_078039452
LinkDB
All DBs
Position
6:complement(21325041..21326934)
Genome browser
AA seq
286 aa
AA seq
DB search
MECIVANVDHMRFDIEVALDEQYGALPLPFTGMDKSTAAVCQFYPRGTCIKGASCPFRHV
RGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETK
VRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLAGFCPDGPNCKFMHPRFELPAVQDMQPK
EGKKVMITCHFCGEGGHKAIYCNKMPPDVREAQVRQEIEGNSHSAHHMNMHNGPPPRGPQ
KPLEEVTCYKCGTKGHYANKCPKGHLAFLSHAGGSGGGNQNQNYRR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcattgttgcaaatgtggatcatatgcgcttcgatatcgaagttgctcttgat
gaacaatatggagcacttcctttaccgtttactggaatggacaaatctaccgctgcggta
tgtcaattttatccgagaggtacttgcattaaaggagcttcttgcccgtttaggcatgtc
agaggagatcgtacgatcgtttgtaaacattggttaagaggactctgtaaaaagggcgat
cagtgcgaatttttacacgaatatgatatgacgaaaatgccagaatgttacttctattct
aggtttaatgcctgtcacaataaggaatgtccattcttacacatcgacccagaaactaaa
gttagagattgtccctggtatgatcgtggattctgtaggcatgggccattatgtagacac
agacatgtgagacgtgtcctttgtatggcttacctagctggcttttgtccagatggacca
aattgtaaattcatgcatccacgatttgaattacctgctgtgcaagacatgcagccgaaa
gaaggaaagaaagtcatgatcacttgtcacttctgcggggaaggtggccataaagctatc
tactgtaacaaaatgccaccagatgtaagggaggcacaagtcagacaagaaatagaaggc
aattcccattcagcacatcatatgaacatgcacaatggaccacctccacgaggaccacaa
aaacctttggaagaggtcacctgttacaaatgtggaacaaaaggtcattatgccaacaaa
tgtccaaaaggtcatctagcatttttgagtcatgcaggaggtagtggaggtggaaatcag
aatcaaaattaccgtagatga
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