Augochlora pura: 144475422
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Entry
144475422 CDS
T11608
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
apur Augochlora pura
Brite
KEGG Orthology (KO) [BR:
apur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apur03021
]
144475422
03036 Chromosome and associated proteins [BR:
apur03036
]
144475422
Transcription machinery [BR:
apur03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
144475422
Chromosome and associated proteins [BR:
apur03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
144475422
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Tex_YqgF
Spt6_S1
S1_RRP5
HTH_10
OB_RRP5_4th
Tex_N
Motif
Other DBs
NCBI-GeneID:
144475422
NCBI-ProteinID:
XP_078047458
LinkDB
All DBs
Position
9:11150693..11157757
Genome browser
AA seq
1769 aa
AA seq
DB search
MADFLDSEAEESEEEEELNENEKKKLKKIKAVEESEEEEEEDDEDRLREELKDLIDDNPI
EESEGEDSDGSGTSKKRKKSDDEDFDDRLEDEDYDLIEENLGVKVERKRFKRLRRIQDEE
SEEEQEKEVDEDRDAIANELFEGSGDEREISMEDERRSERSHRPEVETFDEEGSEGEYTD
ADDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEEE
EEDDEYLDEEDAERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPER
MQLRSVPVTPVAEGSDELDLEAEWIYKQAFCRPTISIQDAHLNAEAKERARKGPQTIGKI
KKALDFMRNQHFEIPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKDNLLKLFEK
MRNHQLDEIMKNPDAPLADNVRVIKDDDIERLKNVQTSEELNDVYHHFMLYYNHEIPAMQ
ESVRQKEKEARREAKLQKRRQQLVEAEENGEDPPPEEEPEVEEEEETDETLKQAVRTGPY
SICRRAGLDGLAKKFGLTPEHFAENLRDNYQRHEVDQEPTEPLTIASEHCNQILGTPEEV
LKAGQLMVAIQLAREPLVRKCVREMYMERAKISIKPTKKGIKEIDENHPIYAMKYLKDKP
VRDLVGDQFLNLVIAEEDKLITISLSDSIEGNTTSNYVDETKQLYYRDEFSKNVQDWNAL
RVGSVEMALTRMVIPSLKKELKTNLIAEAKECVMRACCRKMYNWIKVAPFTCELPEEEDE
EWDTSKGLRVMGLAYVPDYSQAAFTCLIAPDGECTDYLRLPHLMKRKNSYREDEKVMKEA
DLLALRNFLATKKPHVVVIGGESREAMMIAADVKECITTLAEEEQFPAIQVEICDNELAK
IYSNSNKGVSEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHSLQDQLPK
DELLENLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRL
ENRTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAV
DALEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNCR
YKDLRVPYQSPSAERLFDILTKETPETFYVGKLVLATVVGISHRKPQGDQLDQANPVRND
ETGLWQCPFCLKNDFPELSEVWNHFDAGACPGKATGIRLRLDNGISGYIHIKNLSDRHVA
NPEERVSIGQIIHCRIIKIEVDRFSVECTSKSSDLADKNHEWRPQRDPFYDIDTEQKDVK
VEEDAKKAKQRQTYVKRVIVHPSFHNISFAEAEKLMQTMKQGEAIVRPSSKGADHLTVTW
KVTDDVYQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKY
YKLTVEGIKDKAEEILKEQKKDNPGGIPYIISAAKNYPGKFLLSYLPRTRCRHEYVTVSP
EGFRFRGQMFGRVNDLFRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYHTTPGAVSGMNQE
AIQRVAQNLPHHMLHSLSQVANQTPHHYPPHTPGTASVAGYGGVHTYPNTPYTPSGQTPF
MTPYQTPHHTPHHGQPTPRYGQQTPNHQQGPFVHPPPPSVATPGHHRSTPSHRPTPPMST
PGDPMDWKKAAEAWARLKTGPRMSSSTPRYEESRKTPRNYEESVGRTTPRNRTSTRTPSY
KSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttctagattctgaagcggaggaaagcgaggaggaggaggagttgaatgag
aatgagaagaaaaagttgaagaagataaaggccgtcgaagagagtgaggaagaggaagag
gaagacgacgaagatcgcttacgcgaggaacttaaggatttgatagacgacaatcccata
gaagaaagtgaaggggaggacagcgatggatctggtacttcgaaaaagcgcaaaaagagt
gacgacgaggattttgatgatcggttggaggacgaggattatgatttgatagaagaaaat
ttaggtgttaaagttgaaaggaaacgtttcaaacgcctccgcaggatacaagatgaggaa
tctgaagaagaacaagaaaaggaggtggacgaggatagggatgctatcgcgaatgagcta
tttgaaggctctggagacgaaagagaaattagtatggaagacgaaaggagaagcgaacgg
agccacaggccggaagtggagacgttcgacgaggaaggaagcgaaggagagtacaccgac
gcggatgattttatcgttgacgatgacggcagaccaatcgccgagaaacgtaaaaagaag
aagcctatattttccgatgcagcattacaagaggctcaggatatttttggtgttgatttc
gattacgacgagttcggtaagtatggcgaagaggactacgaggaggaagaggaggaggag
gaggaggacgacgaatacttggacgaggaagatgccgaaagaccgagaagaccaaagaaa
caattgaagaagaagaccacaaggaagagtatttttgaaatttacgaaccgagcgaactg
aaacgtggtcatttcaccgacatggacaacgaaatacgcaacacggatatacctgaaaga
atgcagctacgttcggttcctgttacacctgtcgcagagggttccgatgagttggatctg
gaagccgagtggatctataagcaggcgttctgtcgtccgactatctctattcaagacgct
cacttgaacgccgaagccaaagaaagagctcgaaagggaccgcagacgattggaaaaatt
aagaaagctttagattttatgcggaatcaacactttgaaattccgttcatatcgttttac
agaaaagaatacgttctgccagagctgaatattaatgacctttggaaggtgtacaaattc
gacgcgaaatggtgtcagctgcgccaaagaaaagataatctattgaaattgtttgaaaag
atgcggaaccatcagctcgacgagattatgaaaaatcctgacgctccattagctgacaac
gtacgtgtgatcaaggatgatgacatagaacgactaaagaacgtgcaaaccagcgaggaa
ttgaacgacgtgtaccatcatttcatgctctactacaaccacgagattccggcgatgcag
gagtctgtccgacagaaagagaaagaagcacgacgagaggcaaaacttcaaaagcgtagg
caacaactcgtggaagctgaagaaaacggcgaagatccaccaccagaggaagaaccggaa
gtggaggaggaagaggagacagatgagactttgaaacaagcagtacgaaccggtccgtac
tcgatctgcaggcgagctggacttgatggcttagcgaagaaattcggcctcacaccggaa
cactttgccgagaatctgcgagacaattatcaacgacacgaggtggaccaggagcccacg
gagccgttgaccatcgcgagcgagcactgcaaccaaattctcggaacgccggaagaggta
ctgaaagctgggcagcttatggtggcgatacaattggctcgcgaaccactggtcagaaaa
tgcgtccgggaaatgtacatggaaagagcaaaaatatcgattaaaccaacaaaaaagggg
atcaaggagattgacgagaaccatcctatctacgcaatgaagtatctcaaggataaaccc
gtgcgtgacctcgttggcgatcagttcttaaacctggtaatagccgaagaggataaactg
atcacgatctcgttaagcgatagcatcgaaggcaacactactagcaattatgtagacgag
acaaagcagctatattatcgggacgagttcagcaaaaatgtccaagactggaacgctttg
agagttggcagcgtggagatggcactgacgcgtatggtcatacccagcctaaagaaagaa
ctcaaaacgaatctaatcgcggaagctaaggaatgtgtgatgagagcatgctgtcgtaaa
atgtataattggataaaagtggctccgttcacttgcgagctaccagaagaggaggacgag
gaatgggacaccagcaagggacttcgcgtgatgggtctggcgtacgttcccgattactct
caagctgcgttcacctgcctcatagctccggacggggagtgtaccgattacctaagacta
ccccatctgatgaaacgaaagaacagctaccgggaagacgagaaagtcatgaaggaggcc
gacctgctggctctcagaaatttcctagccacaaagaagccacatgtagtagtgatcgga
ggtgagtctagagaggcgatgatgatcgctgccgatgttaaagaatgcattacgacactg
gcggaggaagaacagttcccggctattcaagtcgagatttgcgacaatgaattggccaaa
atctactcaaatagtaacaagggtgtgtccgaatttcgggactatccagagctgttgcgg
caggcaatctcattggccagaagaatgcaagaccctctggttgagttctctcaattgtgc
accgccgacgaggagatactctgtttgaagtaccacagtttgcaggatcaattgccgaag
gacgagctccttgaaaacctgtatctagaattcgttaatagggtgaacgaggtcggtgtt
gacgtgaataaggcagtacagcaagcctattgtgggaacctggtgcaattcgtatgtggt
ctcggtccacgaaaaggacaagcgttgatcaaaatgctgaaacagaccaatcaaaggtta
gagaacagaacacagctggtaaccgcttgtcacatgggacccaaggtttttattaattgc
gccggttttatcaagatagatacgaacagcttgggagacagcaccgaagcgtacgtggag
gtactcgatgggtcccgtgtgcacccagaaacctacgaatgggcgagaaaaatggcagtc
gacgcgcttgagtacgatgacgaggatgcgaaccccgccggtgctcttgaagagatttta
gagtcgcccgagaggctgaaggacttggatcttgacgcgttcgcggaggagcttgagaga
cagggattcggtaacaagtgcgtcacactctacgacataagggcagagctgaattgtcgt
tacaaggatttgcgggtgccctatcagtcgccgagtgcggagaggttgttcgatattctg
accaaagagacgccagaaacattctatgtgggcaaactggtccttgcaactgtggtgggt
atcagccataggaaacctcagggcgatcaactcgatcaggcgaatcccgtaagaaacgat
gagactggtctgtggcagtgcccgttctgcttgaagaacgatttccctgagctctccgag
gtctggaatcattttgacgcaggtgcttgcccgggtaaagcaaccggtatcaggttgagg
ctggataacgggatatctgggtacattcacattaagaacttatccgacagacacgttgcc
aatcccgaggaaagagtcagcatagggcagatcattcattgccgtatcatcaaaattgag
gttgatcgattcagcgttgagtgtaccagcaagagcagtgatcttgcggacaagaaccac
gaatggagaccacaacgcgatcctttttacgacatcgacacggagcagaaagacgttaag
gtcgaggaggatgcgaaaaaggcgaagcaacggcaaacctacgtaaagcgagtgatcgtt
cacccatctttccacaatatcagttttgctgaagcagaaaaactgatgcagacgatgaag
caaggtgaagcaatcgtcagaccgagcagcaagggtgctgaccatttaacggtcacgtgg
aaagtcactgacgatgtctaccagcacattgacgttagagaagaagggaaagagaacgcg
ttttctttgggacaaagcttgtggatcgggaacgaagagtttgaagatttggatgagata
atagcgaggcacgtgaacccaatggccgcgtatgcttcagagctgttagacttcaagtat
tacaaactcaccgtggaggggatcaaagacaaggctgaagaaatattgaaggagcaaaag
aaagacaatcctggaggaataccatacataatatctgctgccaagaattatcctggtaaa
ttcctattatcctacttaccaagaactcgatgtcgccacgagtacgtgacagtgtcgccg
gagggattccgattccgaggtcaaatgttcggcagagtgaacgatctgttccgctggttc
aaggagcatttcagagatccggtaccaggacaatcgactcctagcactccacgcggtgcc
atgacttccagaacaccttaccataccactccaggagcagtgagcggcatgaatcaagaa
gcgatacaaagagtagcccaaaatcttcctcatcacatgctacactctctgtcacaagta
gcaaaccaaactccacatcactacccacctcatactccaggaacagcaagcgtagctggt
tatggtggtgttcacacctatccgaacacaccgtacacgccatccggacaaacgccgttt
atgacaccgtaccagacgccgcatcatactccacaccatggtcagccaactcccagatac
ggacagcagacacctaatcatcaacaaggtcccttcgttcatccacctcctccctcggtc
gccacaccaggtcaccataggtccactccatcgcacagacctacacctcctatgtcgaca
cctggcgacccgatggattggaaaaaggcggcagaggcctgggcgagattgaaaactggc
ccccgaatgtccagctcgacgccacgatacgaggaatcgagaaaaactcctcgaaactat
gaagaatccgtcggtagaacaacgccacggaatagaacttcgacgcgcacaccatcttac
aaatctccacggggaacgccgcatactaattctagtcctcggagtatgtctctcagcgga
gacggtactcctctgtacgacgaaagctaa
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