Alistipes putredinis: L6V35_04810
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Entry
L6V35_04810 CDS
T08021
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
aput
Alistipes putredinis
Brite
KEGG Orthology (KO) [BR:
aput00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aput03009
]
L6V35_04810 (rlmD)
Enzymes [BR:
aput01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
L6V35_04810 (rlmD)
Ribosome biogenesis [BR:
aput03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L6V35_04810 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
N6_N4_Mtase
TRM5-TYW2_MTfase
Methyltransf_15
RrnaAD
MTS
Cons_hypoth95
Methyltransf_11
PCMT
FtsJ
DOT1
PrmA
Motif
Other DBs
NCBI-ProteinID:
UKI40006
LinkDB
All DBs
Position
complement(894759..896099)
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AA seq
446 aa
AA seq
DB search
MGRHNGQVVFVPMTVVGDVVDVQIRSCHRRFMEGDCRALRETFRAACRAFLRAFRRMRRL
QVAKTCLMKKQLEFKRSQVIDQLTRIGKIKLPEVRPTIGSKATRFYRNKLEFTFSPKRWL
TYEEIASGADIEPAPALGFHVPGMFDKVMDVSKCYLQAEPSNAIRDEIKRFCIEHEYPFY
DIRLHTGLMRGVVIRTASTGEVMVIVVFAEQDTERIDALMKHLESAFPQITSLMYIVNTK
LNDSLSDQTPVLAAGRDHIMERMEGLDFRVGPKSFYQTNSAQALELYSVARSLADISEND
TVYDLYTGTGTIANFVAQKCRKVVGIEYVPEAIEDAKTNSRINGIGNTEFFCRRHEKVLD
DAFVQLHGRPDVVILDPPRAGVDADVIDVILRAAPDRIVYVSCNPATQARDVALLDEKYE
VTAVQPVDMFPHTHHVENVIKLEKRR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccacaacggacaagtggtgttcgttcccatgaccgtggtgggcgatgtagtg
gacgttcagatacgcagctgccaccgcagattcatggagggggactgtcgtgcgcttcgt
gaaacgttccgagcagcgtgccgagcctttttgcgagcatttcggcgtatgcggcggctg
caagtggcaaaaacctgccttatgaaaaagcagctcgaattcaaacgcagtcaggtcatc
gaccagctcacccgcataggcaagataaaactgccggaggtccgcccgacaatcggttcg
aaagccacgcgcttttatcgcaacaagctcgaattcaccttctcgcccaaacgctggctg
acatacgaggagatagcctccggtgccgacatcgagccggctccggcgctcggattccac
gttccgggcatgttcgacaaggtgatggacgtaagcaaatgctatctgcaagccgagccg
tccaacgccatccgcgacgaaataaaaaggttctgcatcgagcacgaatatccgttctac
gacatccgcctacacacgggcctcatgcgcggcgtagtgatacgcaccgcctcgactggc
gaggtgatggtgatagtggtgttcgccgagcaggacacggagcgaatcgatgcgctgatg
aaacatctggaaagcgcattcccgcagattacctcgctcatgtacatagtcaataccaaa
ctcaacgactcgctttcggaccagacacccgttctggccgccggccgcgaccatatcatg
gagcgcatggaggggctggatttcagggtagggcccaaatcgttctaccagaccaactcg
gcacaggcgctcgaactctactcggtggcacgctcccttgccgacatatcggagaacgat
accgtctacgacctttacaccggcaccggcacgatagccaacttcgtggcgcaaaaatgc
cgcaaggtcgttggcatagagtacgttccagaagccatagaggatgcgaagaccaactcc
cgcataaacggaatcggcaatacggagtttttttgccggcgacatgaaaaagttctcgac
gacgctttcgtgcagctccacggccgccccgacgtggtgattctcgaccctccgcgtgcc
ggcgtggatgcggacgtgattgatgtcattctgcgtgccgcacccgacagaatcgtctac
gtgagctgcaatcctgcgacccaagcccgcgacgtggcactgttggatgaaaaatacgag
gtcactgccgtacagccggtggacatgttcccgcatacgcaccacgtggagaacgtaata
aaattggagaaaagacgttag
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