Aspergillus puulaauensis: APUU_10461A
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Entry
APUU_10461A CDS
T08081
Symbol
SUB2
Name
(RefSeq) suppressor of the cold-sensitive snRNP biogenesis mutant brr1-1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03013
Nucleocytoplasmic transport
apuu03015
mRNA surveillance pathway
apuu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
APUU_10461A (SUB2)
09122 Translation
03013 Nucleocytoplasmic transport
APUU_10461A (SUB2)
03015 mRNA surveillance pathway
APUU_10461A (SUB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apuu03019
]
APUU_10461A (SUB2)
03041 Spliceosome [BR:
apuu03041
]
APUU_10461A (SUB2)
Enzymes [BR:
apuu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
APUU_10461A (SUB2)
Messenger RNA biogenesis [BR:
apuu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
APUU_10461A (SUB2)
Spliceosome [BR:
apuu03041
]
Complex C
Other components
EJC/TREX
APUU_10461A (SUB2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
APUU_10461A (SUB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Ned1_M
Motif
Other DBs
NCBI-GeneID:
64967638
NCBI-ProteinID:
XP_041549827
UniProt:
A0A7R8AHN8
LinkDB
All DBs
Position
1:complement(join(1059095..1059140,1059207..1059464,1059516..1059876,1059932..1060342,1060954..1061209))
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AA seq
443 aa
AA seq
DB search
MSHEEDLIDYSDEELQTTDAAATTAAPAANGAQAKKEGSELTVTGGRADKKGSYVGIHST
GFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLH
QLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIETLSNKD
TFPNIIVATPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPTDKQ
VMMFSATLSQEVRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYVKLSEAEKNRKLNELLD
TLEFNQVIIFVKSTIRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVA
TDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTPEDEQVLKDI
EKRFEVALPEYPEDGVDSSTYMA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgaggaggatctcattgactactccgatgaggagcttcagaccactgacgcc
gcagccactaccgctgcccccgccgccaacggggctcaggccaagaaggaaggtagcgaa
ttgacggtcaccggtggccgtgcggacaagaagggaagttacgtcggtatccactcgacc
ggtttccgcgactttctgctcaagggcgaacttttacgtgctatcaccgattgcggtttc
gaacatccttcggaggtccagcaagtttgcattccgaccgctattctgaacgtcgatgtt
ctctgccaggccaagtccggtcttggaaagacggctgtcttcgtacttaccacccttcac
cagctggagcctgttcctggggagtgttccgtcttggttatgtgccacactcgtgagttg
gcttatcagatcaagaacgaatacgctcgattcagcaagtatcttcctgatgtgaagacc
gccgtcttctacggtggtactcccatccagaaggatatcgagactctgtcgaacaaggac
actttccccaacatcatcgtcgctactcccggtcgtcttaacgccctcgtccgcgacaag
aagctttctctccgcaacgtcaaggcttttgttctcgacgagtgtgacaagatgcttgac
cagattgatatgcgccgcgacgttcaagagatcttccgcgccacccccaccgacaagcag
gtcatgatgttcagtgctactctctcgcaggaggtccgacctatctgcaaaaagttcatg
aggaatccgctggaagtttacgtcgacgatgacactaagcttaccctccacggtcttcag
caatactacgttaagctcagtgaggccgagaagaaccgcaagctgaacgagctgctcgac
accctcgagttcaaccaggtcatcatcttcgtcaagagcacaattcgtgccaatgagctc
gacaagttactgcgcgagtgcaacttccccagtattgctgtgcactctggcgttagccag
gaggaacgtatcaaacgctacaaagagttcaaggaattcaacaagcgtatctgtgtcgcc
accgatgtttttggacgtggtatcgatattgaacgtattaaccttgccatcaactacgat
ctgcccgcggatgcagactcctacctgcaccgtgtcggtcgtgccggtcgtttcggtacc
aagggtctctccatctctttcgtgagcactccggaagatgagcaggtcctgaaggatatc
gagaagcgtttcgaagtcgcccttcctgagtaccccgaggacggtgttgactctagcacc
tacatggcttag
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