Aspergillus puulaauensis: APUU_10769A
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Entry
APUU_10769A CDS
T08081
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03030
DNA replication
apuu03410
Base excision repair
apuu03420
Nucleotide excision repair
apuu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APUU_10769A (RFC4)
03410 Base excision repair
APUU_10769A (RFC4)
03420 Nucleotide excision repair
APUU_10769A (RFC4)
03430 Mismatch repair
APUU_10769A (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apuu03032
]
APUU_10769A (RFC4)
03036 Chromosome and associated proteins [BR:
apuu03036
]
APUU_10769A (RFC4)
03400 DNA repair and recombination proteins [BR:
apuu03400
]
APUU_10769A (RFC4)
DNA replication proteins [BR:
apuu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
APUU_10769A (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
APUU_10769A (RFC4)
Chromosome and associated proteins [BR:
apuu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
APUU_10769A (RFC4)
DNA repair and recombination proteins [BR:
apuu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
APUU_10769A (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
APUU_10769A (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
AAA_14
nSTAND3
AAA_16
DNAX_ATPase_lid
RuvB_N
AAA_22
Viral_helicase1
AAA_assoc_2
Rad17
MeaB
AAA_3
Mg_chelatase
NTPase_1
Gp44_lid
AAA_11
KTI12
AAA_18
AAA_19
Motif
Other DBs
NCBI-GeneID:
64967946
NCBI-ProteinID:
XP_041550135
LinkDB
All DBs
Position
1:complement(join(1823496..1823721,1823773..1824346,1824403..1824623,1824678..1824766))
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AA seq
369 aa
AA seq
DB search
MARAESSASASRNALKANVSGAPPDYELPWVEKYRPVFLDDVVGNTETVERLKIIAKDGN
MPHVIISGMPGIGKTTSVLCLARQLLGDAYKEAVLELNASDERGIDVVRNRIKGFAQKKV
TLPPGRHKLVILDEADRFVIVNVFGFRAHEILFSMTSGAQQALRRTMEIYSSTTRFAFAC
NQSNKIIEPLQSRCAILRYARLTDAQIVKRLKQVCDAEKVEHTEDGLAALVFSAEGDMRQ
ALNNLQSTWSGFGLVSGDNVFRVVDSPHPIKVQAMIKACWEGKIDAALETLNELWDLGYS
SHDIISTMFKVTKTIPTLSEHSKLEFIREIGFTHMRILDGVQSLLQLSGCVSKLCKINMQ
PELFEPPKS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagctgaatcctcagccagtgcttctcgcaatgccctaaaggctaatgtttct
ggtgcccctccggactatgaattgccctgggtcgaaaagtaccgtccagtatttttggac
gatgttgttggtaacacagaaactgttgaacgtttaaaaatcattgccaaggatggaaac
atgcctcacgttattatatcggggatgcctggtattggaaaaacgacctcagttctttgt
ctggcgcgacagttgctaggagatgcctacaaggaggctgttttggagctgaacgctagc
gatgagagaggtatcgatgtcgtgcggaatcgtatcaaaggatttgcgcaaaaaaaggtc
acactacccccgggccgccacaagcttgttatactggatgaagcagataggtttgtaatt
gtgaatgtgtttgggttccgtgctcatgaaattcttttcagcatgacctccggtgcccag
caagcactgcgacggacgatggaaatctactcctctacgacgcgattcgcctttgcatgc
aaccagtcaaacaaaattattgaaccactccaatccagatgcgccattctccgctacgct
cgattgaccgatgcacagatagtaaagcgattgaagcaggtttgcgatgcggaaaaggta
gaacacaccgaggatgggctggcagccctggtattcagcgccgagggtgatatgcgtcaa
gccctaaacaacctgcagagtacctggtctgggtttggcttggtcagtggagataatgtg
ttccgcgtggtagacagtcctcatccaatcaaggtccaggcaatgatcaaagcttgctgg
gagggaaaaatagatgccgctctggaaacgctgaatgagctatgggatctgggatactcc
tcccacgacattataagcactatgttcaaggtgacgaagacgattccaaccctgtccgaa
cattcgaaattagagttcatccgcgagattggcttcacgcatatgcgaattttggacggt
gtgcagtcacttttgcagttgagcgggtgtgtttcaaagctttgcaaaataaacatgcaa
ccggaactattcgagcccccaaagtcataa
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