Aspergillus puulaauensis: APUU_11381S Help Entry APUU_11381S       CDS       T08081                                  Name (RefSeq) uncharacterized protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism apuu  Aspergillus puulaauensis Pathway apuu03013   Nucleocytoplasmic transport apuu03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:apuu00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     APUU_11381S    03015 mRNA surveillance pathway     APUU_11381S  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:apuu03019]     APUU_11381S Enzymes [BR:apuu01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      APUU_11381S     5.6.2.5  RNA 5'-3' helicase      APUU_11381S Messenger RNA biogenesis [BR:apuu03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      APUU_11381S    mRNA cycle factors     Common to processing body (P body) and stress granule      APUU_11381S BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD Viral_helicase1 Helicase_RecD NPHP3_N UvrD-helicase SLFN-g3_helicase PIF1 nSTAND3 AAA_22 AAA_16 ATPase AAA_10 Motif Other DBs NCBI-GeneID:  64968558 NCBI-ProteinID:  XP_041550747 UniProt:  A0A7R7XC73 LinkDB All DBs Position 1:join(3510110..3510324,3510419..3513440) Genome browser AA seq 1078 aa AA seqDB search MSASAEYQASGMESELDRTVGGPRRRRHDDDDEGPDNSEDDDLESTNSGPADNAKVPGAL EEEKELAPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHP ESSLGDTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPL IEDRSFLTWLVAAPSDQEQLRARHLSPQMIAKLEEMWKENSQATVADLEKATAVDDEPAP VLLRYDDAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKLE LGDVKLAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTH NFTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPG LPELNGSQINAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAV DQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDTNIELIKLNQLKGELGEL SSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLGKLKFRTVLIDESTQSAEPECM IPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPC LSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPIMDNPMMFWSNLGNEEISASGTSYLNR TEATNVEKIVTRFFKAGVHPKDIGIITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVD AFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNC LLQHFKERHCLVEGPLSNLQESLIQFSRPKQAYRGPQRFQMAYNHVSNVTSGYMNGRNGQ RNDFHDTGSVVGYIPDDVSSVHSSALGGGVGIPSGYPPMFQQFADSWPTLPGARRANGNR GRGAPSVAGESVAATESDITGSIIDGKGPEHGGVSLAGLSINDMSKQPSLSQSDRLKRYV ESGAREPYKPGVPDNGSIFGGSSASIRVTRGVPGHIHDDDDARSVSTAFASQVGGNYD NT seq 3237 nt NT seq  +upstreamnt  +downstreamnt atgtcggcgtccgctgaataccaggcttctggaatggagtcagaactggaccgaactgtt gggggtccgcgccgacgcagacatgatgacgacgatgaaggtcctgataactccgaggat gatgacttggaaagtacaaacagtggccctgcagacaatgcgaaagtccctggggctttg gaggaagaaaaagagcttgccccgcacgcatgcgcgtactgcggcatccacaaccctagt agcgttgtgaaatgtctagcttgcagcaaatggttttgcagcgcccgtggcaacacctcc tcgtcccatatcgttaaccaccttgtccgggctagacataaggaagtccagttacatccc gaatcgtcccttggtgatacggttctggaatgttataactgtggcaccaaaaacgttttc ctcctcgggtttatccccgctaagtccgacactgtcgtcgttctgctatgtcgccaacct tgcgccgctatgccatcttcgaaggatatgaattgggatacatcgcgctggcagcctttg atcgaagaccgctcgttcttgacttggcttgtggccgctccgtcggatcaggagcaactc cgagctcgtcatttgagcccacagatgattgccaagctcgaggaaatgtggaaagaaaac tcacaagctacggtcgccgatttagagaaggctaccgccgttgacgatgaacctgcacca gtcctcctgcgctacgacgatgcattccagtaccaaaacattttcggcccactcgttaag attgaggcagactacgaccgcaagttgaaggaatcgcagtcacaggatggattgattgtc cgctgggatcttggtctcaacaacaagcatttagctagctttatactgccgaaactcgag ctcggagatgtaaagctggccgttggagatgagatgaggttgaagtacaccggcgaactg cgacccaaatgggaaggggtcggatacgttatcaaaatccctaacaatcagtctgacgag gttactattgagttgcgagccaagggtgaccacaaatcagtgcccacggaatgcacgcat aactttactgccgattatgtctggaaatcgacctctttcgatcgtatgcaacttgcaatg aagactttcgctgttgatgagatgagtgtgtcgggctatatcttccatcgtctcctaggc cacgaggtggcagctgcgccaatgaagacgcagatgccgaaaaagtttagcgttcctgga cttcctgagctcaacggcagccagataaatgcagtcaagagtgtccttcaacggcccttg agtctgattcagggacctcctggaactggtaaaactgtcacatccgcgacaatcatttat caccttgccaagctcaatggtggccaggttcttgtatgtgcaccctccaacgtcgccgtt gatcaactttgcgaacgcattcatcgaactgggctcaagactgtccgtgtgaccgcgaag tcacgcgaggatgtggaatccccagtcggcttcttgtctctgcatgaacaagtccgtctc aatgacaccaacattgagctcattaaactcaaccagctcaagggcgaacttggggagtta tcgagtcaagatgagaagcgcctgaagcaacttaccaggtccgctgagcgcgagatcctg aacaatgccgacgtaatttgctgcacatgtgttggtgcgggcgatcctcgtctcggaaaa ctcaaattccgtactgtgttgatcgacgagtcaacacaatctgcagaacctgaatgtatg atcccgttggtgctaggatgcaagcaggttgtccttgttggcgatcatcaacaacttggc cccgtcatcatgaacaagaaagcggctaaggctggtcttaaccagtccctctttgagcga cttgttattttgggatgctcgccaatccgcttgaatgtccaataccgtatgcacccatgt ttgtctgaatttccctccaacatgttttatgagggatccttgcagaacggcatcacttct tttgatcgtcttcgtcgagaagttgattttccatggcctattatggacaacccaatgatg ttctggtcgaacctcggaaatgaggaaatctcagcttcggggacgtcatatctcaatcgt accgaagccacgaatgtggaaaagattgttactcgttttttcaaggccggtgtgcaccca aaggatatcggtatcatcactccatatgaaggtcagcgcagctatatcgttagctccatg caggcaactggaaccttcaagaaagagcactacaaggaaattgaggttgcttcggtggat gctttccagggccgtgagaaagacttcatcattctgtcctgcgtacgctccaacgaccat caaggaattggcttcctgagtgaccctcggcgtctgaacgttgcacttaccagagctaaa tatggtctggtgattctaggaaacccgaaggttttgtctaagcatcctctttggaattgt ctcctacagcatttcaaggaacggcactgtcttgtagaaggcccgttgtctaacctccag gagtccctaatccaatttagccgtccaaagcaggcgtaccgtggacctcagcgattccag atggcctacaaccacgtgtccaatgttaccagtggatatatgaatgggcggaacggtcaa cgcaacgatttccacgatacaggctcggttgtgggttacataccggatgatgtttcttct gtccactcctctgcacttggtggcggcgtgggaattccttctggatatcctcccatgttc caacaatttgcagactcgtggccaactctccctggagctcgtcgcgccaatgggaacaga gggaggggtgcgcccagcgtcgctggagaatccgtagcagcaacggaatccgatattacc ggaagcattatcgatggcaagggccctgagcatggtggtgttagtcttgctggattgagc atcaacgatatgagcaagcagcctagtcttagtcagtctgaccggctgaagcgttacgtg gaatctggagcacgtgagccctacaagcccggtgttcccgataatggtagcattttcgga ggcagctctgctagcattcgtgtcactcgcggagtacctggccatatccatgatgacgat gatgcacgaagcgtctctacagcttttgccagccaggttgggggcaattatgattga

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