Aspergillus puulaauensis: APUU_12018S
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Entry
APUU_12018S CDS
T08081
Symbol
PRP43
Name
(RefSeq) DEAH-box ATP-dependent RNA helicase prp43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
APUU_12018S (PRP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apuu03041
]
APUU_12018S (PRP43)
03009 Ribosome biogenesis [BR:
apuu03009
]
APUU_12018S (PRP43)
Enzymes [BR:
apuu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
APUU_12018S (PRP43)
Spliceosome [BR:
apuu03041
]
Complex A
U2 snRNP components
U2 related factors
APUU_12018S (PRP43)
Complex B
APUU_12018S (PRP43)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
APUU_12018S (PRP43)
Ribosome biogenesis [BR:
apuu03009
]
Eukaryotic type
90S particles
Helicases
APUU_12018S (PRP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
SRP54
AAA_19
T2SSE
Flavi_DEAD
AAA_7
Motif
Other DBs
NCBI-GeneID:
64969195
NCBI-ProteinID:
XP_041551384
LinkDB
All DBs
Position
1:join(5093609..5093922,5093983..5095849,5095919..5096044)
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AA seq
768 aa
AA seq
DB search
MVDRRSDSEDGSRAKRQKMDKSRADPRDNPYLAHMYADTSSNGNTSSEADNKNSAFAKLQ
RHKTTAALAQKVEDNEFNPFTSQPYSKKYFSILETRRDLPVHAQRDEFLRLYQESQILVF
VGETGSGKTTQIPQFVLLDDLPHTQRKMVACTQPRRVAAMSVAQRVAAELDVTLGEEVGY
SIRFEDMTSSKTLLKYMTDGMLLREAMNDNELSRYSTIILDEAHERTMSTDVLMGLLKEV
VLRRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTV
LQIHATEDDGDILLFLTGEEEIEDAARKISLEGDEMVRDADAGPLKVYTLYGSLPPHMQQ
KIFDPAPAARRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLL
VSPISKASAQQRAGRAGRTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKKL
GIDDLVHFDLMDPPAPETLMRALEELNYLACLDDEGNLTQLGRLASEFPLDPALAVMLIS
SPEFYCSNEVLSITALLSVPQIFVRPASQRKRADEMKNLFAHPDGDHLTLLNAYHAFKSP
EAQDNTKQWCHDHFLSLRALQSADNVRMQLLRIMEREELEMISTAFEDKKYYENIRRALC
AGFFMQVAKKEAQGKSMYMTIKDHQNVLLHPSTVLAHDAEWVLYNEFVLTTKNYIRSVTA
VKPEWLIDIAPTYYDVSSFPKGDIRSSLLRAAERLSRKEKMRADGKRR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggttgatcgacgctcagactcagaagacggatctcgcgcaaaacgccagaagatggat
aagtctagggctgacccccgggataatccctatctggctcatatgtacgctgatacgtcc
tctaacggcaacacaagctctgaggctgataacaagaattcagcctttgccaagctgcag
cgacataaaacaactgctgcgctggcgcaaaaggttgaagataacgagttcaatccgttc
accagccagccatactccaagaagtatttctcgatcctagaaactcgtcgtgatcttccg
gtccatgcgcaaagagatgaattcttgaggctgtatcaagaatcccagattctggtcttt
gtcggtgagactggttctggaaaaacgacacagatcccccaattcgtcctgctcgatgat
ctcccacatacccaacggaaaatggtcgcatgtacccaaccccgtcgtgtggcagcaatg
tcagtggcccagcgtgttgctgcagagttggatgtcactcttggagaggaggtcggttac
agcatccgtttcgaggacatgactagctccaagacacttctcaagtacatgacggatggt
atgcttttgcgagaggccatgaacgacaatgagcttagtcgctacagcaccattattctt
gacgaagcgcacgaaagaacaatgtcgacagatgttcttatgggacttctcaaagaagtc
gtgttgcgcaggcctgatctaaagattatcatcatgtctgccacactggatgcgcagaag
ttccaacgttacttcaacgacgctccattgcttgccgtccctggtcgtacccatcctgtc
gagattttctataccccggagcccgagcaagattatgtggaagccgccattcgcacagtt
ctccaaattcatgccactgaggatgatggtgatattcttctctttttgaccggagaagag
gaaattgaagatgcagcgcgcaagatatctcttgagggtgatgaaatggttagagacgct
gatgcaggtcccttgaaagtatacaccctctacggtagtctcccgccacatatgcaacag
aagatcttcgatccagcgcccgccgcgcgccgccctggaggtcggccaggtaggaaggtg
atcgtgtcaaccaacattgcagaaacatctcttacgatcgacggtatcgtttatgttgtc
gaccccggtttctcaaaacagaaaatttacaacccccgtattcgtgtcgagtctctgcta
gtctcgccaatctccaaggcctccgcgcagcagagagctggtcgtgctggtcgtacacgc
cccggaaagtgtttccgcctttacacagaaagtgccttcaagaaggaattgattgaccag
acttatcccgagattttgcgctctaacttgtcgtcgaccgtgcttgagctgaagaaattg
ggcattgatgacttggtccatttcgatctgatggaccccccggcgccagagacgcttatg
cgagctctcgaggagcttaactaccttgcatgccttgacgatgagggcaatttgacacag
ctggggcgtcttgcatcagagttccccttggacccagcgcttgctgtcatgcttatcagc
tcacccgagttctattgttccaacgaggtcctgtccataactgcattgctctccgtacct
cagatctttgtccgaccagcatctcaacgcaagcgtgcggacgaaatgaagaatttgttt
gcccaccctgacggcgaccaccttaccctactcaatgcctaccatgcgttcaagagccct
gaagcgcaggacaacactaagcaatggtgccacgaccacttcctttccctgcgagcccta
cagtccgccgacaacgtgcgcatgcagcttctacgaatcatggaacgcgaggagctagag
atgatttcgactgcatttgaagacaagaaatactacgaaaatattcgccgcgccctgtgt
gctgggttcttcatgcaagttgccaagaaggaagcccagggcaagagcatgtacatgacc
atcaaggatcaccaaaacgtgctcctgcacccttcgaccgttcttgcccacgacgccgaa
tgggtcctatacaacgagtttgtcctcaccacgaaaaactacatccggagcgtcacggct
gttaaaccagaatggctaatcgatattgcccctacctattacgatgtttcgtcattcccg
aagggcgatattcgctcttctctgctccgcgctgccgagaggctctcgcgcaaggagaag
atgcgtgccgatgggaagagacgttga
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