Aspergillus puulaauensis: APUU_12048A
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Entry
APUU_12048A CDS
T08081
Symbol
SYF1
Name
(RefSeq) pre-mRNA-splicing factor syf1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
APUU_12048A (SYF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apuu03019
]
APUU_12048A (SYF1)
03041 Spliceosome [BR:
apuu03041
]
APUU_12048A (SYF1)
Messenger RNA biogenesis [BR:
apuu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
APUU_12048A (SYF1)
Spliceosome [BR:
apuu03041
]
Complex B
Other components
Prp19-related factors
APUU_12048A (SYF1)
Complex C
APUU_12048A (SYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
TPR_2
NRDE-2
Motif
Other DBs
NCBI-GeneID:
64969225
NCBI-ProteinID:
XP_041551414
UniProt:
A0A7R7XDB6
LinkDB
All DBs
Position
1:complement(join(5192238..5192517,5192583..5194594,5194668..5194721,5194788..5194904,5194967..5195056))
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AA seq
850 aa
AA seq
DB search
MPGTLLPPRSHRQHAEMDRSSASRPDLYLIADNDNVYEQDLLRNPGSIKPWLAYIEYKQQ
NGTLYEQAFVLERACKQLPRSYKLWKMYLEFRTKHLKNRDATKYRAEFQKVNALFERALI
LLNKMPRIWEMYLSFMLQQPIVTQTRRTFDRALRALPVPQHNRIWKLYKAFARSASGQTA
VKIWARYMQIHPENAEEYIHLLVEMGQYTDAVKRYMGVLNDPRFQSRDGKSNFQLFTEMV
DLLVSKAKKIETGPQSGIDVDAILRSGIDRFPDQKGKLWAGLATYWITKGNFEKARDVFE
EGITTVMTVRDFTLVFDSYVEFEESIIGNLMEAAAVRTDNNQADEEADFDLDLRMLRFEQ
LMDRRPFLVNDVLLRQNPNNVIEWEKRVALWGDNNVEIVQTYTAAIAAINPKKAVGKFPE
LWVNYAKFYERGGDLGPARVIFEKAVKVPFKSVAELAETWCEWAEMELRSENFDKAVEIM
GKATQAPKKSTVDYFDETLSPQQRVHKSWRLWSFYVDLVESVSSIEETKKVYERIFELRI
ATPQTVVNYANLLEEHKYFEDSFKVYERGLDLFTYPVAFELWNLYLTKAVDRKIGIERLR
DLFEQALDGCPPKFAKPLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRFEMFEFYIT
KSASNFGLPSTRPIYERGIAALPDQEAKEMCLKFAEMERRLGEIDRARAIYGHASQFCDP
RTNAPFWQKWEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQAIARGQQKGEGEA
EPETGGEEMDATTADAMAALERQARAPVGFVAASTGPEGGNRPPVNQAPAAAAPANPDAI
DLDDEDMDAD
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgccagggacgcttctgcccccgagatcccaccggcaacacgcagagatggatcgatct
tcggcctctcggccggatttgtacctgattgccgataatgacaatgtatatgagcaggat
ctccttcggaatcccggcagcatcaagccatggcttgcgtacatcgaatacaaacagcaa
aatgggacgctttatgagcaggctttcgttctagagcgtgcttgtaaacagctcccgagg
tcctacaagctttggaagatgtacttggaatttcgaacgaaacatcttaagaatcgcgat
gcaaccaaatatcgggccgaatttcagaaggtcaacgcactgtttgagcgtgcgttgatc
ctgctcaacaaaatgcctcggatatgggagatgtacctctccttcatgcttcaacagccg
atcgttacacaaactaggagaactttcgatcgtgctctgcgagctttgccagtacctcaa
cacaaccggatctggaaattatacaaggctttcgcacgctctgcttccggtcaaaccgca
gtgaagatttgggctcgatacatgcaaatccacccagaaaatgcagaggaatacatccac
cttcttgtggagatgggccagtataccgacgctgtgaagcgctacatgggggttcttaac
gacccaaggtttcagtcccgggacggaaagagtaacttccagctgttcactgaaatggtg
gatttactagtctcaaaggcgaagaaaatcgagacagggcctcagtctggaattgatgtg
gacgcgattctccgcagcggcattgatcgatttccagaccaaaaaggtaaactttgggcc
ggactagcaacttactggatcacgaaaggcaacttcgagaaggcgcgcgatgtctttgag
gagggcattacgacagtcatgacagttcgcgatttcacccttgtatttgattcctatgtc
gaatttgaagaatccatcataggcaacctgatggaggctgcggccgttcggactgataat
aaccaggctgatgaggaagccgatttcgatctcgatcttcggatgctcaggtttgaacag
cttatggatcgacgaccgtttttggtcaatgatgtgctactcaggcaaaatcccaacaat
gtcattgaatgggaaaagagggtggctctttggggtgacaacaacgtggaaatcgtccaa
acatacaccgctgctatagcagccatcaaccccaagaaggctgtgggcaagtttccggag
ctctgggtcaactacgcgaaattctacgagcgcggtggagacttgggccctgcacgagtt
atattcgagaaggccgtgaaagttcctttcaaatcagttgcagagctcgcggaaacatgg
tgcgagtgggcggagatggaactgcgcagcgaaaacttcgataaagcggttgagatcatg
ggcaaggcaacgcaagcgcccaagaaatcgacggttgattactttgacgagacgctctcc
cctcagcaacgcgttcacaagagctggaggctatggagtttctacgtcgacctggtggag
agtgtctcatcgatagaggagacgaagaaggtgtatgagaggatcttcgagttgcgaatt
gctactcctcagaccgttgtcaactacgccaacctccttgaggaacacaaatatttcgag
gattcgttcaaagtatatgaacgaggcctggacctcttcacctatccagttgcctttgag
ctttggaatctttatctcacaaaagctgttgatcgaaagattggcattgagcgtctgcgg
gatctctttgaacaggcgctcgatggctgtcctccgaagttcgccaaacccctctatctg
atgtacggaaacctggaagaggagcggggattggctcggcacgcaatgcgaatctacgaa
cgtgccactcgggctgtctctgatgaagaccgctttgaaatgttcgaattctacatcacg
aagtccgcctccaacttcggattgccgtccacgcggccgatctacgagcggggtattgcc
gctttgcctgatcaagaggccaaggaaatgtgcctcaagttcgccgagatggaaaggaga
ttgggcgaaatcgatcgcgcacgtgcgatttacggccatgcatctcaattctgcgatccg
cgcaccaacgcgccattctggcagaagtgggaagctttcgaagtccaacacggaaacgaa
gataccttcaaggaaatgcttcgtatcaagcgaagtgttcaagctcaatacaacaccgac
gtcaacttcattgcgtcccaggccatcgcccgcggtcaacaaaagggtgaaggcgaagct
gaaccggaaactggaggggaagaaatggacgcaaccacagcagatgccatggcggcgttg
gaacgacaagcacgtgcacctgtcggcttcgttgcagccagtaccggacctgaaggtggc
aatcgccctcctgtcaaccaagcacctgcagccgctgctccagcgaaccccgacgccatc
gatctcgatgacgaagacatggatgcggactag
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