Aspergillus puulaauensis: APUU_20230A
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Entry
APUU_20230A CDS
T08081
Name
(RefSeq) uncharacterized protein
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APUU_20230A
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apuu03019
]
APUU_20230A
Enzymes [BR:
apuu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
APUU_20230A
Messenger RNA biogenesis [BR:
apuu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
APUU_20230A
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
MukF_C
Motif
Other DBs
NCBI-GeneID:
64969803
NCBI-ProteinID:
XP_041551992
LinkDB
All DBs
Position
2:complement(join(540153..540574,540621..541260,541307..541533,541581..541673,541736..541970))
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AA seq
538 aa
AA seq
DB search
MDVTTQTFPYHLARMLQDLASSVFVSIDLEFSGIPKAQQGRAGPPQSLQQRYQEVKESAS
KYQILQVGLTFCHEDAEAAKYTLKPYNLYLSPIIDRRLEVERNWSFQSSAVEFLLENKFN
MDALYRAGVTYISREEEEQAISIAVQRNKPGTAQTSMDVKETDYESLAFLILARVLIDDW
IALGDKRDDYLNIPPPSSQINSQGLKGMPSVLNRFQKRLVHQLVEVEYPGYVTIGRPTFV
QIVHYDEDRENAIRDKRVQRVRERVWNETGFRWIAEALAGGDLSNLSPGYFGAIRANMGP
VGQGETLKDFVDDFKKNLKAHRPVLVGHNLFMDLIYFFRCFFGPLPDSVEDFQAMVHEHF
PVLIDTKYLATHDCGSINPRSSLQEINDSLLQIPIPEIIIHPHFARYHIEKIDHEAGYDS
LLTAQVFIKLSAQLGERHQVGLGKSILTTNSQTNEQTGLDNRFSQLQIEETRAGPSSATD
NDDDSMRSGEVLGEYSPAVETRQAKKGHLIPRPSFQFWKVYGNKLRVFGTEERVCDIG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaccacacagacattcccgtatcatcttgcgcggatgctgcaggaccttgcg
tcctctgtctttgtctccattgacctggagttctctggtatcccaaaggctcaacaggga
cgagcaggcccaccgcagagcttacagcagagataccaagaagtcaaagagtctgcgtcc
aaataccaaatactccaagtcggcttgaccttttgtcatgaggatgccgaggcagcaaag
tatacactgaaaccatataatctatatctgagcccgatcatcgaccgtaggctagaggtt
gagcggaactggtcattccagagtagcgcggttgagttccttttggaaaacaaattcaac
atggacgctctgtaccgagccggcgtcacatatatatcgagagaggaggaagaacaagcc
atctcgatagctgtccaaaggaataaaccaggcacggctcagacatcgatggatgtcaaa
gaaaccgactatgagtcgctagcattccttatacttgcccgggtgctcatcgatgattgg
attgcccttggtgataaacgtgatgactacctcaatatcccgccaccttccagtcaaatc
aactcccaggggctcaagggtatgccttcggttttaaacaggtttcagaaaaggctggtc
catcaacttgttgaggtggaatacccaggttatgtcacaattggacggcctacatttgtc
cagattgtccattacgatgaagaccgtgagaacgctattcgagacaaaagggtacagcgg
gtgcgagagcgagtttggaatgagacaggattcagatggattgctgaggcactggctgga
ggcgatctctcgaatctcagccccggttatttcggtgccatcagagccaacatggggccc
gtaggccaaggcgaaacgcttaaggactttgtagacgacttcaagaagaacctaaaagca
catcggcctgttcttgttggccataacctcttcatggacttgatatatttctttcggtgc
ttttttggtcctctcccggacagtgtggaagacttccaagcgatggtgcacgaacatttt
ccagtcctcattgacacaaagtatcttgccacacatgattgcggatcgatcaacccaaga
tcatcgttgcaagagatcaatgacagtttgcttcaaataccgatacccgaaatcattata
catccacacttcgccaggtaccatatagagaagatcgaccatgaagcgggatacgatagt
ctgcttacagcacaagtattcatcaaactctctgcgcagcttggcgaacggcaccaggtc
gggttgggcaagtcaatcttaactacaaactcccaaacgaatgaacaaactggtcttgac
aatcggttttctcaacttcagattgaagagactcgggcgggaccctccagtgcaactgat
aacgacgacgatagcatgagaagcggtgaagttttaggcgagtatagccctgcagtcgag
acacggcaggccaaaaaaggacacttgattccaagaccaagttttcaattttggaaggtt
tatggcaacaaactacgcgtcttcggaacagaggaaagggtctgtgatattggttga
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