Aspergillus puulaauensis: APUU_21386S
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Entry
APUU_21386S CDS
T08081
Symbol
NOT4
Name
(RefSeq) transcriptional repressor general negative regulator of transcription subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APUU_21386S (NOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apuu03000
]
APUU_21386S (NOT4)
03019 Messenger RNA biogenesis [BR:
apuu03019
]
APUU_21386S (NOT4)
04121 Ubiquitin system [BR:
apuu04121
]
APUU_21386S (NOT4)
Enzymes [BR:
apuu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
APUU_21386S (NOT4)
Transcription factors [BR:
apuu03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
APUU_21386S (NOT4)
Messenger RNA biogenesis [BR:
apuu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
APUU_21386S (NOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
APUU_21386S (NOT4)
Ubiquitin system [BR:
apuu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
APUU_21386S (NOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
zf-RING_2
zf-C3HC4_3
NS3
Motif
Other DBs
NCBI-GeneID:
64970959
NCBI-ProteinID:
XP_041553148
UniProt:
A0A7R7XHX5
LinkDB
All DBs
Position
2:join(3375587..3375639,3375707..3375773,3375863..3375978,3376049..3376417,3376470..3377983,3379152..3381355)
Genome browser
AA seq
1440 aa
AA seq
DB search
MSSRQQLDSVIDDDDEFCPLCIEEFDLSDKNFKPCPCGYQICQFCYNNIKTHSEEGRCPN
CRRSYDDSTIQYKVPDADEFKADLALKHRKAAAAKKKETEKREIEASSRKNLAGVRVVQK
NLVYVIGLNPTIRDESQLLQTLRGRDYFGQYGDIEKIVVSKAKPGGNPNQGIGVYVTYAR
KADAATCISAVDGSPNGDRVLRAQYGTTKYCSSFLRNEQCHNRNCTFLHETGEDSDSYSR
QDLSSMNTLSSQRSNGVPGPSSATPPYVARSSAQPISQTLRRQPSKDDAASNRSLDGPAL
PSSASWANKDSAINRTRRASLTGSQASQSPRPAVATVATSSEDTKRNEKPPQSQQEHQQT
PSPSDASSSIPQPPPSQPPADQAAPLLDGLVKAVNSPCFKFVFSAAGLPPDELALIDNHP
SFIDPYGGVKRRAMREKAEQERVKREQELLQSAPVEDEGPESGSLQLGGEPDDANPPRGR
TGRDSHGAIQPPSQQGTTASSAVGSPVSAASHQFQGINLNNRSLTPLQQQQLMLLKSASN
QQAGLVDPLQSGINPTAFDHVAQTRQGLLQNQVAQLNALQAQSRQNSRFSFTNDASSKNL
ANSRMLNQPTSLMQSGTPNPLAAPSPQHTLASNYYTSGVQGPPPGLKTAGTPPVSGGGMF
AQGHGFTSNTSLGLGGKQEANPELMRELLRSRSGTNAGGLPGQDNKLDEEFPPLGATPKD
KRSVDSFGSFMRSQLMSDSQPLGRSGTPSLPPGLPLPQGHSVSALFQDHFKPSSPGSSVS
GPPLGLEPASPSVAAISRSSEDDGMGLESKEDPEGESSSKTAKNAGEISLGSPVAKATAR
VRSQPKEEPVTTETKTTQPKLNETKTSTSSSIKAKPTKLDLSFNTQGSEQFSKVEPPYHI
PSAHAAPASTANSRPNTPLTAASRVSESPAPRQPRVLRVIDTPKAETPPPMSATQSIASL
PIGGKGRSRRPSVSSQSRSDTPGDLGSEADLYASTSASRANSPPASSRIGSAPVRAVTKS
QMKKERKQKAKEAEAKKQETTSVTEEPVQAPIVGRKRKTKKAPAESTIPPSENTTSATKS
APPVSNEDNEKPEPVKKSRPAEATPKEPKPTPPEVKMPAEQKQPEAWRSRNTVEQLLKDA
ESTGASLKDLFSERTSPLQALLSQLHKSGALDLNNHPLFNPSNLNQRSDMKCTSDDYEDL
KQPIELTEQHRKVLLRGEPIRMGTDSVSLKDRCLISPRGCILHHLSPEEEERYLALEKSI
SWAIDTFQEYPGIPITEPDATNRGGGLDALFATPENFNVCWVDETSAGVSVSSPTSGQST
TEGPISSIAPNILSAMEADSTRTHNWAIDNTAELMNATATSVRSFAAATAKHMLGAAGVV
MGNLPDLDDVVGMTDEELRSFAVKSQKELESSRKDLDAIDKKLSALVKRNKKLAQQALAT
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcgccaacagcttgactccgtcattgacgatgacgatgagttttgccccctt
tgtatcgaagaattcgacctgtcggataaaaacttcaaaccatgtccttgcggctatcag
atctgtcaattctgttacaacaacataaagacgcatagcgaagaagggcgatgcccaaat
tgccggcgatcttacgatgatagcaccattcaatataaggtgcctgatgcggatgagttc
aaagcggaccttgcacttaaacaccgcaaagcagctgccgcgaaaaagaaggaaactgaa
aagcgagaaatcgaagcctccagccgaaagaatcttgcaggtgttcgtgttgtacagaag
aacctcgtttacgtgatcggtctcaaccctacaatacgcgacgaaagccaacttcttcaa
actctgcgcgggagggattatttcggccaatatggggatatcgagaagattgtcgtcagc
aaggcaaagcctggtggcaacccaaaccagggcattggcgtctacgttacctatgctcgg
aaggcagatgctgcaacttgcatcagtgcggtggatggctcgccaaatggggatcgggtt
ctaagggcgcaatacggaaccacgaagtactgctcgtcattcttgcgcaacgagcaatgt
cacaaccggaattgcactttcttacacgagactggcgaagacagtgacagctacagccgg
caagatttgtcctcaatgaataccttgtccagtcaacgctcaaacggagtccccggcccc
agctctgctaccccgccgtacgttgcacgatcctccgcacaaccgatctcccaaacatta
cgacgtcaacccagcaaagatgatgccgctagcaatcgttctctcgacgggcccgctctt
ccgtcttcagctagctgggcgaacaaggactcggcaatcaaccgaaccagacgggccagc
ctcacaggtagccaagcatcgcaaagcccacgacctgctgttgccacggttgcgacatct
tcggaggataccaagcgcaatgagaagccgccacaaagtcagcaagagcaccaacagacc
ccgtcaccctcggacgcgtcatcctcaatacctcaaccccctccatctcaacctccagcg
gaccaagcagctcctttgctagatggtttggtaaaggctgtcaactctccatgcttcaaa
ttcgtcttctcggcggccggtctgccaccagacgagcttgctctcatcgataaccacccc
tcattcattgatccatacggcggggttaagcgtcgtgcgatgcgagagaaggcggaacag
gaacgcgtgaaaagggaacaagagcttctgcagtctgctcccgtggaggatgagggccct
gagagtgggagtcttcaactcggcggtgagccagacgatgccaatcctccgagaggccgt
acaggtcgcgattctcacggtgcaattcaacccccatcccagcaaggcacaaccgcaagc
tcagctgtcggctctcctgtctctgctgctagccatcaattccagggcatcaatctaaac
aaccgcagcctgaccccattacagcaacagcagcttatgctactcaagtcagctagcaat
caacaggcaggccttgtcgatcccttacaatctggaatcaatccaactgcatttgaccac
gtcgcgcaaactcgacagggtcttttgcaaaaccaggttgctcagcttaatgcactccag
gcgcagagtcgtcagaactctcgattctctttcacaaatgacgccagctctaagaatctt
gcgaactctcggatgctgaaccagccaacgtccttgatgcagtcgggtacacctaaccca
ctcgctgcacccagcccacagcacactcttgcaagcaactactataccagtggggttcag
ggcccacctccaggtctgaaaacagcaggcactccacctgttagtggaggcgggatgttc
gctcaaggtcatggcttcacatccaacacgagtctcggattgggtggaaagcaggaagcc
aacccggaattaatgcgcgagctgctgcgcagccgcagtggcaccaatgcaggtggtttg
ccgggacaagacaataagcttgacgaagaatttccgcctcttggtgccacaccaaaagac
aagcgctcggttgatagctttggatcgttcatgcgatcgcagttgatgagtgactctcag
cctttaggccgttccggtacaccgagtctcccaccaggcctgccccttccacaaggacat
tccgtgtcagcattgttccaagatcacttcaaaccctcaagcccggggtcatccgtttct
ggcccgcctctcgggttggagcctgcatctccttccgtagctgccatttctcggagctcc
gaggatgatggaatggggttagaatcgaaggaagatcccgaaggcgaatcatcctctaaa
acggctaagaatgcgggagaaatatctctgggatcccccgtggcaaaggcaactgctaga
gttcgttcccagccaaaggaagaaccagtcaccactgagaccaaaaccactcaaccaaag
ctgaacgaaactaagacttccacatcctcttctatcaaggccaagccgacaaaattggat
ttgagcttcaacactcagggctcagaacagttttcgaaggtggagccaccataccacatc
ccgtctgctcatgccgcccccgcgtccaccgctaattcacggcccaatacgccgttgacc
gcggcttctcgagtatctgagtccccagcgcctcgccaacctagagtccttcgtgttatc
gatactccaaaggcagagactccaccacctatgtccgctactcagtccattgcgtccctt
ccgattggagggaaaggccgctcgaggcggcccagtgtttcgtctcagagccgttccgat
acgcctggtgatcttgggtcagaggcagacctctatgcctccacatcggcttctcgtgct
aactctccccctgcatcttccaggattggctctgcaccagtacgggctgtcacgaaaagc
caaatgaaaaaagagcggaagcagaaagccaaggaggcagaggcgaagaaacaggagact
acctcggtgactgaagagccggtgcaagcccctatcgttggtaggaagcgaaagaccaag
aaggctccggctgagtcgaccattccgccatcggagaacactaccagtgctaccaagtct
gctcccccagtcagcaacgaggataacgagaagcctgagccggttaagaaatcaaggcca
gctgaggcaacccccaaggagcctaagcccacgcctcccgaggtgaagatgcctgcagaa
cagaagcagcctgaagcttggcgatccaggaacactgttgagcagctactgaaggatgca
gaatccaccggtgcttcgctcaaggatcttttctctgaacgcacgtctcctctacaggcg
ttgctatcacagcttcacaagtcgggtgccctggatctcaacaaccatcctctatttaat
ccttctaacctcaaccaacgctccgatatgaaatgcacttcggacgattacgaggatctg
aagcaacccatcgaactaaccgagcagcatcgtaaagtgctgctgcgcggggaacccatc
cggatgggcacagattctgtctcgctgaaggataggtgtcttatcagcccccgtgggtgc
attctccaccacctatcccccgaggaggaagaaagataccttgccctagaaaagagcatt
tcctgggctatcgataccttccaagaataccccggtattccaatcaccgagcccgatgcc
acaaaccgcggcggcggtttagacgctctattcgctacgcccgagaatttcaacgtctgt
tgggttgatgaaacatccgcgggggtctcagtttcatcccctacctccggtcaatccaca
accgaagggcctatttcttccatcgcgccgaatattctctccgcaatggaggcggacagt
acccgaacccacaattgggctatcgacaataccgcagagctcatgaacgcgacagccacc
tcagtacgctcttttgctgctgccacagcgaagcatatgctcggtgcggcgggcgttgtc
atgggtaacttgcccgatctcgacgatgtcgtggggatgacagatgaagagctgcgttct
ttcgcagtcaagtcgcagaaagaacttgagtcgtcgcggaaggacctggacgctattgat
aagaagcttagtgcgttggtaaagaggaacaagaagctcgcgcagcaggctctggctact
tag
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integrated database retrieval system
