Aspergillus puulaauensis: APUU_21408S
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Entry
APUU_21408S CDS
T08081
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
APUU_21408S (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apuu03400
]
APUU_21408S (MSH6)
DNA repair and recombination proteins [BR:
apuu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
APUU_21408S (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_29
DUF5740
AAA_27
AAA_23
Motif
Other DBs
NCBI-GeneID:
64970981
NCBI-ProteinID:
XP_041553170
LinkDB
All DBs
Position
2:join(3424880..3425179,3425237..3425287,3425360..3425528,3425581..3427970,3428019..3428720)
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AA seq
1203 aa
AA seq
DB search
MAKEPPASSPSETPLKRSTSSTQNMKNQKSILGFFQKSSPSTPSTRNAEPASSPAPRASA
SRPVQRGEKSGKIASKFTQDLAPVPSSELGLPDEEDDKKQISPEEDSKKATTSPSRRSAK
KVNYVESDSEGEDDDEIFRPARKNNRASKRRKVSPESDDDFEQDVQNGVESDDEMDDFVV
PDASDEEVKPSKKRKRPATQSKAKSSSLPPPSEVDEDLDLDLPDSSSGTALKWTYDPENM
EPRQARAAPASTSKSPSSTAKPKAHTTEPEQRYPWLANLRDIDGHPIGDPEYDPRTLYIP
PLAFSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRM
VGVPESSLDHWANQFVAKGYKIARVDQSESALGKEMRERNGKKAGGKEDKIIKRELACVL
TAGTLVEGAMLQDDMSTYCVAIKEAIIEDRPAFGIAFVDTATGQFFLSEFVDDMDMTKFE
TFVAQTRPQELLLEKSTVSQKALRILKNNTGPTTIWNYLKPGKEFWEADITVKELDVSEY
FVSQDNDNVHAWPDALRRARDKEFVISAFGALVQYLRLLKIDRDLVTIGNFSWYDPIKKA
SSLVLDGQTLINMEIFANSFDGGIDGTLFQLLNRCMTPFGKRMFKQWVCHPLIDPKRINA
RLDAVEALNADSSVRDQFSSQLTKMPDLERLLSRIHAANCRAQDFVRVLEGFEQIEYTMS
LLKDSGSGEGVIGQLISSMPDLTELLEYWKTAFDHSQAKENGILVPKPGVEEDFDNSQEN
IKQLHQDLDDLLKRVRRELGSTAICYRDNGKEIYQMEVPIKVKNIPKNWDQMSATKQVKR
YYFPELRTAIRNLQETQETHSQIVKEVSKRFFERFDEHYATWLSAVRVVSQLDCLISLAK
ASSSLGEPSCRPIFVDEERSVLELEELRHPCLLSSVDDFIPNDIQLGGNSPNIDLLTGAN
AAGKSTLLRMSCVAVIMAQIGCYLPCKSARLTPVDRIMSRLGANDNIFAAQSTFFVELSE
TKKILAEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEF
ENHPEISPKRMKIHVDEDERRVTFLYKLEDGVAEGSFGMHCAAMCGISNKVIERAEVAAK
QWEHTSRLTESLERRKGGGLVGLGWWSDIAWALRETTKEADDDNPAEITDRSLEVLRRAI
EAL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaccgcccgcttcatctccctcggagactccgctgaaacggtccacctcc
agcactcagaatatgaaaaaccaaaagtcaatactggggtttttccagaaatcctcgcca
tcaacaccctcaacacgcaatgcggagcccgcgtcttcaccggctccgagagcatcggct
tctcgccctgtccagcgcggagagaagtccggcaagattgcctccaagttcacacaggac
ctggcgcctgtaccaagtagtgaattgggactaccggatgaggaggatgataagaagcag
attagccctgaagaagactcgaaaaaggcgacgacttctccatcacgcaggtcagcgaag
aaagttaactatgtcgaatcggactccgagggtgaagacgacgacgaaatatttcgtcct
gctcgaaagaacaaccgcgcttcgaaaaggagaaaggtgtcgccggaaagcgatgacgac
tttgagcaggatgtgcagaatggagtggaatccgatgacgaaatggacgactttgttgtt
ccggacgcttcagacgaggaggttaaaccatcaaaaaagcgcaaaagaccagctacacag
tcaaaggccaagtcttcatctttgcctccaccatctgaggttgatgaagatcttgacttg
gatctccctgactcctcgtcaggcactgccttgaagtggacatatgacccagagaatatg
gaacctcgtcaggctcgcgcagcacccgcatctaccagcaaatcaccatcaagtaccgcc
aaacccaaggctcataccactgagcctgagcaacgctatccttggcttgctaatctccgg
gatattgatggccatcctatcggtgacccagaatacgaccctcgcaccctgtacatccct
cctcttgccttctccaagttctcccccttcgagaagcagtattgggagataaaacagaag
ttctgggacactgttgtctttttcaaaaagggcaaattttacgagctctacgaaaatgac
gccacaattggacaccaattgtttgatttgaagctcactgatcgcgtgaacatgcgcatg
gttggagttccggaatctagtttggatcactgggccaatcagttcgtagcgaagggatac
aagattgcgagagttgaccaatctgaatcagctcttggaaaggagatgcgcgaaaggaat
ggtaagaaggctggtgggaaggaagacaaaatcatcaaacgagaattggcctgtgttctt
acagcaggcacgcttgttgaaggtgctatgcttcaagacgacatgtcaacatactgcgtt
gccatcaaagaagctattatcgaagatcgtccggcttttggaatcgcctttgttgacacc
gcaactggccaattcttcctttcagaattcgttgacgacatggatatgaccaagtttgaa
actttcgttgcgcaaacacggcctcaggagctacttcttgagaagtcaaccgtgtcacag
aaagcgctccgcatattgaagaacaatactggccccacgacaatctggaactatctgaaa
ccgggtaaagagttttgggaggccgatattaccgtcaaagagcttgacgtgagcgagtac
tttgtctctcaggacaatgacaatgtccatgcatggccagatgctctccgccgggcccgt
gacaaagagtttgtcatatcagctttcggcgcgttggtacagtacctcagactcctgaaa
atcgaccgggatctggtcacaattggaaatttctcttggtatgacccaattaagaaagcg
tctagcctagtcctggatggccaaaccctcatcaacatggaaatcttcgcgaactcgttt
gatggcggcatcgatggaacactctttcaactcctcaaccgttgcatgacacccttcggg
aaacggatgtttaagcagtgggtatgccatccgttaatcgatcccaagcgtatcaacgct
cgactagatgccgtagaagccctgaacgctgattctagcgttcgggaccaattttcctcg
caactcaccaagatgcctgacctcgagcgtcttttatcgcgcatacatgctgcgaactgc
agagctcaagatttcgtgcgagtactcgaaggttttgagcagatcgagtataccatgagc
ctgctcaaggacagtggttctggcgagggtgttattgggcagttgatcagctccatgcct
gatttgactgaattgctagagtattggaaaactgcatttgaccactctcaagcaaaggaa
aacggcatacttgtccccaagccaggagtcgaagaggatttcgacaactctcaagagaac
atcaagcagctacatcaagaccttgacgatctcttgaaacgggttcggcgtgagttaggc
tctacagccatctgctacagagacaacgggaaagagatttaccagatggaagtaccaatc
aaggtcaaaaatatccccaagaattgggaccagatgtccgccaccaagcaagtcaaacgc
tactatttccctgaattgcgaacggccatccgcaacctgcaggaaacgcaggaaacacac
agtcaaatcgtcaaagaagtatccaaacggttctttgaacgatttgacgagcattatgcc
acctggctttctgctgtacgggttgtctcacagctggactgcttgatcagtctggccaaa
gcttcttcaagtctgggtgaaccgagctgtcgccctatattcgttgacgaagaacgaagt
gtcctggagcttgaggagcttcggcacccttgcctcctttcatctgttgatgatttcatt
cctaatgacattcaactgggtggcaattcccccaatattgacctacttactggtgctaac
gctgccggaaagtccactctgcttcgcatgtcttgcgttgctgtaatcatggcccaaatt
ggttgttatctaccctgcaaatccgcccggttaacaccagtcgaccgcatcatgtcgcgc
ctcggagccaatgacaatatattcgctgcccaatccaccttctttgtcgagctctcagaa
actaagaagatccttgcggaagctacccctcgctcccttgtcattctcgatgaactaggc
cgtggaactagttcttacgatggagtcgcagttgcccaggccgtgctgcaccacgttgca
acccacatcggcgctttaggcttcttcgccacacactaccactctctcgccgccgagttc
gaaaaccatcctgagatctcacccaaacgcatgaagattcatgtagacgaggatgaaaga
cgtgtcaccttcctctataaactcgaagacggtgttgcggagggtagtttcggcatgcac
tgcgctgctatgtgtggtatatcaaacaaagtcattgagagggccgaggtcgctgctaag
cagtgggaacatacgagccggctcacggaaagtctcgagcgccgcaagggtggcgggctc
gttggcctcggctggtggagtgacattgcctgggctcttcgcgagacaaccaaggaggcg
gatgatgataatccagccgaaattactgatagaagcttagaggttcttcggagagccatt
gaagccctgtga
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