Aspergillus puulaauensis: APUU_41238S
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Entry
APUU_41238S CDS
T08081
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
APUU_41238S
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apuu03021
]
APUU_41238S
03019 Messenger RNA biogenesis [BR:
apuu03019
]
APUU_41238S
Transcription machinery [BR:
apuu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
APUU_41238S
Messenger RNA biogenesis [BR:
apuu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
APUU_41238S
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pcf11_C
CID
Pfc11_Clp1_ID
zf_PCFS4
VHS
DUF7340
UBZ_FAAP20
Zn_ribbon_ISL3
Motif
Other DBs
NCBI-GeneID:
64974799
NCBI-ProteinID:
XP_041556988
UniProt:
A0A7R7XQ90
LinkDB
All DBs
Position
4:join(3208267..3208434,3208531..3208974,3209029..3209741,3209791..3209986,3210039..3210407,3210466..3210516)
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AA seq
646 aa
AA seq
DB search
MSAALASDEVAEDYKNSLEDLTSNDRFQISNLTVIAKENTEHAMAISRVLENHIRTTPPA
QKLPALYVVDSIVKNVGTPYTLFLGRNMYQTFMNAYTLVDSQTRRKLDEMLKTWKEPVPG
SLDTRPVFPPDITRSIENALIKARTAALQQQQARGQQDVFNRGRVGTPPGWPNTPTPPQN
AARHPPTANPLQGQRPGPANGYPTSETIPVRSTSTPQLQSQEVDITSLNRDVEVLIAAAR
NEFANNPLDPSVQQRLKALLDLQGIMQRQQLTQEQLRLVRDQVSALAPKAPNPQTQPAPP
HLPVTSTPTVGTPPVAQSFSQPLQQLLNPGTLAELIKATAARQQSTPPPQIPALPQIPVS
STPQIPTSGAENPIVAALRAKGLLPAASAPPAASVPPPAAGGTFPFIVPGQVRYTPPVPT
PQAVSTADIQVNVQMNTASIKIPRNMLIASLYEARSNRCGTCGRRFFATEEGKEKKARHL
DWHFRTNQRMGDAARRAQNRSWYVDERDWIKSRELGDDQVITDTEAANENVAGTENSPSK
KGPVKQWIRAPNDATLRNTPCPICQEKFESTWSEDVQDWIWQDAVKVGARVYHASCYAEV
TKDGPTPTRREAPSGRTGTPDSVLGKRKSEGTNSPGQNVRVKTEPM
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgcgctggcctctgatgaagtcgccgaggactacaaaaactccttggaagat
ctaacgtcaaatgacaggtttcagatcagcaatttaaccgttatcgcaaaggaaaacacg
gaacatgcgatggctatctcccgcgtcctggagaaccacattcgaacaacaccaccggct
caaaagctgcctgcattgtatgtagtcgactccatcgtgaagaatgtaggcactccctac
actctatttcttgggcggaatatgtatcagactttcatgaacgcctacacgctggtcgac
tcgcaaactcgcaggaagttggacgagatgttgaagacatggaaagagccggttccgggg
tcgttggatacgagaccggtcttcccacctgatatcactcgcagcattgagaatgccctg
atcaaggcgaggactgctgcccttcagcaacaacaggctaggggccagcaagacgtcttc
aatcgcggtcgtgttggaacccctcctggatggccaaacacacctacacctccgcaaaat
gccgctcggcatccgccaactgcaaatcccctgcaaggccaacggcctgggccagccaac
ggatatccgacgagcgaaacgattccggtccgctcaacttcaacgccccagcttcagtca
caagaagtcgacatcacatccttaaaccgtgatgtggaggttctcatagctgctgctcga
aatgaatttgcgaacaaccctctcgacccatctgtacaacagagattaaaagctcttcta
gatttgcaaggcatcatgcaacgccaacaactcacccaggaacagctaagacttgtccgt
gaccaagtatcagcgcttgctcccaaggctcccaacccgcaaactcaacccgctccacca
cacctcccagtcacctcaactccaactgtaggcactccacctgtcgcacagtcattctct
cagccacttcagcaactcttaaatccaggaacacttgcagaactcatcaaagctacagct
gcacgacagcaatccactccgccaccacaaatacccgccctcccccaaatacctgtcagt
agcactccgcaaatacctacttcgggcgcagagaatccgattgttgcagctttaagggcg
aaaggcctcctacctgcggcatctgcacccccggcagcatcagttccaccaccggccgct
ggtggtacgtttccattcatagtacctggacaagtacgatacacgccacccgtgcctaca
ccgcaagcagtgagtactgcagatatacaagttaatgttcaaatgaacaccgcatctatc
aaaatcccacgtaacatgttgatcgctagtctctacgaggcacggtcaaatagatgcggt
acctgcggccgtcggttctttgcaaccgaagaagggaaagaaaagaaagcacgacatctc
gattggcactttcgaaccaaccagcggatgggtgacgccgccaggcgtgctcagaatcgc
agctggtacgtcgacgagcgggactggataaaatcacgggaactgggggacgatcaagtt
atcacggacactgaggctgcaaacgagaacgttgctggaactgaaaacagtccctcaaag
aagggcccagttaaacaatggattcgagcacctaacgatgccacattgcgcaacacccca
tgtcctatctgtcaggagaagttcgaatctacatggtcagaagatgttcaagattggatc
tggcaagacgctgttaaagtaggcgctcgagtataccacgccagctgctatgcggaagtg
accaaggacggtccgactcccactcggcgagaggccccatcagggcggacagggaccccc
gattcagtgctgggcaaacgcaaatctgagggaaccaactcacctggtcaaaacgtacgg
gtcaaaacagagccgatgtga
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