Aspergillus puulaauensis: APUU_41406S
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Entry
APUU_41406S CDS
T08081
Name
(RefSeq) uncharacterized protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03420
Nucleotide excision repair
apuu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
APUU_41406S
09124 Replication and repair
03420 Nucleotide excision repair
APUU_41406S
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apuu04121
]
APUU_41406S
03400 DNA repair and recombination proteins [BR:
apuu03400
]
APUU_41406S
Ubiquitin system [BR:
apuu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
APUU_41406S
DNA repair and recombination proteins [BR:
apuu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
APUU_41406S
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR55
WD_LRWD1
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
64974967
NCBI-ProteinID:
XP_041557156
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Position
4:3653792..3655213
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AA seq
473 aa
AA seq
DB search
MNAYLLNRTVGSIPPSTFHSAQSIRLLHSLEPAPGIRFSSTNSQSANDGGHDADSDDVFA
HRAGANVLAIDQYEGRFMVSGGADPSIHLWDLESRAAELSYTHEPVASISRFSHDDAHTH
AITSASIYPFDPTPSTILTTSHDGTLKLSALQPAAITPVHTFKLDCTPYTHSLSSHPGSP
LLVAVGTSEKPVRLLDLRSGLSTHGLPGHSSGVLSVSWAPHRPHILASASTDNRIILFDI
RRAGHNAAIATLDMDDAVGLVQSQNTSGSYHSRPAFSPHARAHNGAVTGVRWTSDGTYLV
TAGQDARIRVWEAATGANTLVHFGPRIQNTSSAHLAERAPLVVPHRHLGAGHETLLWANY
SDSDDRGEIFLLGLREGSFIKRLRVPGLMGRRTYAQGRSNALSAARINSLAWRGNGASGE
GIEVFSAHGDGTVRAWVSRESEEAPTEDEEVEQADRKRKRDVLEEIYQGFMSV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcatatctcctcaatcggaccgtcgggtccattccgccatccactttccactcc
gcgcagtcaatccgcctgcttcacagccttgaacccgcccccgggatccgcttctccagt
accaactcccagtccgcgaacgacggaggacacgatgccgattccgacgatgtttttgcg
cacagagctggagcgaacgtgttagctattgaccagtatgaaggccgcttcatggtctct
ggtggcgccgacccctcgattcacctgtgggatttggagtcacgagccgccgagctgagt
tacacgcacgagcctgtcgcctccatctccaggttctcgcacgacgacgcccatacgcat
gccattacatccgcctccatctaccccttcgatcccaccccgtcgacgatccttaccacc
tcgcatgacggaaccctgaagctctcggccctgcaaccggcggcaatcactcctgtccac
acatttaagctcgattgtacaccgtacacccattctttgtcttcccatccgggctcccct
ctactcgtcgctgttggaacgtccgaaaagccggtccgattgctcgacctacgctctggg
ttgtctacacatggtctccctggtcacagctcaggcgtcctctccgtatcctgggctccc
catcgcccgcacattctagcttctgcctccaccgacaatcgcatcatcctattcgatatc
cgtcgcgcgggacacaatgccgcgatcgcgactctcgacatggacgacgcagtgggtctc
gttcaatctcagaacacctcgggttcgtatcatagccgcccggcattttccccccacgct
cgagcacacaatggagccgtgacgggggtgcgatggacttcggatggaacatatctggta
acggctggtcaagacgcgaggattcgtgtgtgggaagctgcaacgggtgccaacacgctt
gtccatttcggccctcgtattcaaaatacttcatctgcccacttggctgaaagggcaccg
ttggttgttccacatcgtcatctgggcgctggccatgaaacgctactatgggctaattat
agtgattcggacgaccgaggcgaaatattcctcctcggcctccgcgaggggtcctttatt
aagcgcctccgagtcccgggtctcatggggcgcaggacatacgcgcagggacggtccaat
gccctcagcgccgcgcgcattaattcattggcatggcggggcaacggtgcgtccggcgaa
ggcatcgaggttttctcagcacatggcgacgggacagtgagggcgtgggtttcgcgagaa
tcagaagaggcgccaactgaagatgaagaggtggagcaggctgatcgcaagcggaaacgg
gatgtactcgaagagatctaccaaggctttatgtcagtctag
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