KEGG   Aspergillus puulaauensis: APUU_41406S
Entry
APUU_41406S       CDS       T08081                                 
Name
(RefSeq) uncharacterized protein
  KO
K10570  DNA excision repair protein ERCC-8
Organism
apuu  Aspergillus puulaauensis
Pathway
apuu03420  Nucleotide excision repair
apuu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:apuu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    APUU_41406S
  09124 Replication and repair
   03420 Nucleotide excision repair
    APUU_41406S
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:apuu04121]
    APUU_41406S
   03400 DNA repair and recombination proteins [BR:apuu03400]
    APUU_41406S
Ubiquitin system [BR:apuu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     APUU_41406S
DNA repair and recombination proteins [BR:apuu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      APUU_41406S
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd WDR55 WD_LRWD1 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_EML
Other DBs
NCBI-GeneID: 64974967
NCBI-ProteinID: XP_041557156
LinkDB
Position
4:3653792..3655213
AA seq 473 aa
MNAYLLNRTVGSIPPSTFHSAQSIRLLHSLEPAPGIRFSSTNSQSANDGGHDADSDDVFA
HRAGANVLAIDQYEGRFMVSGGADPSIHLWDLESRAAELSYTHEPVASISRFSHDDAHTH
AITSASIYPFDPTPSTILTTSHDGTLKLSALQPAAITPVHTFKLDCTPYTHSLSSHPGSP
LLVAVGTSEKPVRLLDLRSGLSTHGLPGHSSGVLSVSWAPHRPHILASASTDNRIILFDI
RRAGHNAAIATLDMDDAVGLVQSQNTSGSYHSRPAFSPHARAHNGAVTGVRWTSDGTYLV
TAGQDARIRVWEAATGANTLVHFGPRIQNTSSAHLAERAPLVVPHRHLGAGHETLLWANY
SDSDDRGEIFLLGLREGSFIKRLRVPGLMGRRTYAQGRSNALSAARINSLAWRGNGASGE
GIEVFSAHGDGTVRAWVSRESEEAPTEDEEVEQADRKRKRDVLEEIYQGFMSV
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgaatgcatatctcctcaatcggaccgtcgggtccattccgccatccactttccactcc
gcgcagtcaatccgcctgcttcacagccttgaacccgcccccgggatccgcttctccagt
accaactcccagtccgcgaacgacggaggacacgatgccgattccgacgatgtttttgcg
cacagagctggagcgaacgtgttagctattgaccagtatgaaggccgcttcatggtctct
ggtggcgccgacccctcgattcacctgtgggatttggagtcacgagccgccgagctgagt
tacacgcacgagcctgtcgcctccatctccaggttctcgcacgacgacgcccatacgcat
gccattacatccgcctccatctaccccttcgatcccaccccgtcgacgatccttaccacc
tcgcatgacggaaccctgaagctctcggccctgcaaccggcggcaatcactcctgtccac
acatttaagctcgattgtacaccgtacacccattctttgtcttcccatccgggctcccct
ctactcgtcgctgttggaacgtccgaaaagccggtccgattgctcgacctacgctctggg
ttgtctacacatggtctccctggtcacagctcaggcgtcctctccgtatcctgggctccc
catcgcccgcacattctagcttctgcctccaccgacaatcgcatcatcctattcgatatc
cgtcgcgcgggacacaatgccgcgatcgcgactctcgacatggacgacgcagtgggtctc
gttcaatctcagaacacctcgggttcgtatcatagccgcccggcattttccccccacgct
cgagcacacaatggagccgtgacgggggtgcgatggacttcggatggaacatatctggta
acggctggtcaagacgcgaggattcgtgtgtgggaagctgcaacgggtgccaacacgctt
gtccatttcggccctcgtattcaaaatacttcatctgcccacttggctgaaagggcaccg
ttggttgttccacatcgtcatctgggcgctggccatgaaacgctactatgggctaattat
agtgattcggacgaccgaggcgaaatattcctcctcggcctccgcgaggggtcctttatt
aagcgcctccgagtcccgggtctcatggggcgcaggacatacgcgcagggacggtccaat
gccctcagcgccgcgcgcattaattcattggcatggcggggcaacggtgcgtccggcgaa
ggcatcgaggttttctcagcacatggcgacgggacagtgagggcgtgggtttcgcgagaa
tcagaagaggcgccaactgaagatgaagaggtggagcaggctgatcgcaagcggaaacgg
gatgtactcgaagagatctaccaaggctttatgtcagtctag

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