KEGG   Aspergillus puulaauensis: APUU_41496S
Entry
APUU_41496S       CDS       T08081                                 
Name
(RefSeq) uncharacterized protein
  KO
K10756  replication factor C subunit 3/5
Organism
apuu  Aspergillus puulaauensis
Pathway
apuu03030  DNA replication
apuu03410  Base excision repair
apuu03420  Nucleotide excision repair
apuu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:apuu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    APUU_41496S
   03410 Base excision repair
    APUU_41496S
   03420 Nucleotide excision repair
    APUU_41496S
   03430 Mismatch repair
    APUU_41496S
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apuu03032]
    APUU_41496S
   03036 Chromosome and associated proteins [BR:apuu03036]
    APUU_41496S
   03400 DNA repair and recombination proteins [BR:apuu03400]
    APUU_41496S
DNA replication proteins [BR:apuu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    APUU_41496S
  DNA Replication Termination Factors
   ELG1-RFC complex
    APUU_41496S
Chromosome and associated proteins [BR:apuu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    APUU_41496S
DNA repair and recombination proteins [BR:apuu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     APUU_41496S
  Check point factors
   HRAD17(Rad24)-RFC complex
    APUU_41496S
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_assoc_2 AAA_16 AAA_11 AAA_19 AAA_24 RCF1-5-like_lid AAA_30 RuvB_N DUF815 AAA_5 AAA_3 ResIII DEAD AAA_14 SLFN-g3_helicase PhoH AAA_28 Mg_chelatase AAA_7 bpMoxR DNAX_ATPase_lid ATPase_2 AAA_18 AAA_25 UvrD-helicase VTC nSTAND3 RNA_helicase TK ABC_tran PIF1
Other DBs
NCBI-GeneID: 64975057
NCBI-ProteinID: XP_041557246
UniProt: A0A7R7XPL9
LinkDB
Position
4:join(3854432..3854571,3854623..3854710,3854763..3854937,3854995..3855378,3855429..3855841)
AA seq 399 aa
MSDYDDDMDVDAPASKNAVQFSSDNTSGKYKRAAADLPVEAQDNLPWVEKYRPNSLDDVS
GHKDILATINRFVEANQLPHLLLYGPPGTGKTSTILALARRIYGTKNMRQMVLELNASDD
RGIDVVREQIKTFASTKQIFSMAPPAASKSSLASFKLIILDEADAMTATAQMALRRIMEK
YTANTRFCVIANYTHKLSPALLSRCTRFRFSPLKEQDIRVLVDQVIEKEDVRIQPEAVNS
LVTLSRGDMRRALNVLQACHASSKPLPIKNAPKDQAIPEPETITNETIYDCIAAPHPSDI
QQIMTTLLATSDVTSCLNTVNALKINKGLALADILAALGEQLQRLEVPAQTRITWLEGLA
EIEWRLSAGGSETVQTGGLVGVVRNGCELIGDKGVSMAT
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgtcggattacgatgacgatatggacgtggatgcgcccgcatccaagaacgccgtccag
ttcagttctgataacaccagtggaaaatataagagagctgctgcagatttaccagtagaa
gctcaagacaatctaccttgggtagaaaagtaccgcccgaactccctcgacgatgtttcc
ggtcacaaggacatcctagctacgatcaatcggtttgtcgaagcgaatcaattaccacac
cttctcctttatggcccccccggtactggtaaaacctccacaatcctcgccttggcccga
cgaatatacggtaccaaaaacatgcgacagatggttcttgaactcaatgctagtgatgat
agaggaattgatgtggttcgagaacaaattaaaactttcgcaagcacgaaacaaatcttc
tcaatggccccgcccgccgccagcaagtcgtcgctcgcatcattcaagttaatcatccta
gatgaagctgatgcgatgacagctaccgcacagatggctctccgtcggattatggaaaaa
tacactgccaacactcggttctgcgttatcgccaactatacccacaagctctcacccgcc
cttctttcccgttgtactcggttccggttcagtccactcaaagagcaagacatcagagtc
ctggtcgatcaggtgattgagaaggaagacgtgcgtattcagccagaggctgtcaatagc
ttggtcacattgagtcgcggcgacatgcgccgtgctctgaacgtgctccaagcctgccat
gccagcagcaaacctcttccgattaagaatgcgcccaaagaccaggccatccccgaaccg
gagacaatcacgaacgagacgatttacgactgtattgccgcaccacacccgtctgatatt
caacaaatcatgaccacactccttgcaactagtgatgtcacatcatgcctcaataccgtc
aatgcactcaagattaacaagggccttgcgctggcagatattcttgctgcactgggggag
caactccagaggcttgaagttccagcgcaaacgcggattacatggctggaaggactagct
gagattgaatggcgactttctgccggcggatcggagaccgttcaaaccggaggcctggtg
ggggttgttcgcaatggatgtgaattgattggggacaaaggagtgagcatggcaacatag

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