Entry |
|
Symbol |
CRM1
|
Name |
(RefSeq) karyopherin transporter
|
KO |
|
Organism |
apuu Aspergillus puulaauensis
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:apuu00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
APUU_50297S (CRM1)
03008 Ribosome biogenesis in eukaryotes
APUU_50297S (CRM1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
APUU_50297S (CRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:apuu03019]
APUU_50297S (CRM1)
03009 Ribosome biogenesis [BR:apuu03009]
APUU_50297S (CRM1)
03016 Transfer RNA biogenesis [BR:apuu03016]
APUU_50297S (CRM1)
03036 Chromosome and associated proteins [BR:apuu03036]
APUU_50297S (CRM1)
Messenger RNA biogenesis [BR:apuu03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
APUU_50297S (CRM1)
Ribosome biogenesis [BR:apuu03009]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
APUU_50297S (CRM1)
Pre-60S particles
APUU_50297S (CRM1)
Transfer RNA biogenesis [BR:apuu03016]
Eukaryotic type
tRNA transport factors
tRNA export factors
APUU_50297S (CRM1)
Chromosome and associated proteins [BR:apuu03036]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
APUU_50297S (CRM1)
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
5:join(803331..803396,803468..803497,803561..803633,803686..803757,803817..804529,804595..805366,805414..805884,806008..806237,806311..806689,806746..806917,806975..807215)
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AA seq |
1072 aa
MSVSIQELDTTVQAFYEGKGDLQKQAQQTLTEFKQNPDAWLIVGNILQESQYPQTKYLAL
QVLDDVIMTRWKVLPREQCLGIRNFIVNFIIENSKSEEKLRSERAFLNKLNLVLVSILKQ
EWPHNWPTFINEIVSSCHTSLSICENNMAILRLLSEEVFDFSQDQMTSVKARNLKTSMTQ
EFSSIFQLCSEVLNTANQPSLVKATLETLLRFLNWIPLGYIFETPVINTLLTRFLDVPEF
RNVTLKCLTEIGGLQIGHPYNYDERLVHMFTETLTTVSKIIPLSMDLKQTYAKSNSRDQE
FVLNLALFLCSFFSAHLNVVEKLPNRDYLTHAHFYLIRISQIDDREVFKICLEYWTRLVQ
ELYEEMQQLPITDINPLVSMGVSGLSNGGAPHPTTLANYPLRKHKYEEVLSSLRTVMIEK
MVRPEEVLIVENEEGEIIREFVKESDTIQLYKTIRECLVYLTHLDVIDTENIMIEKLAKQ
VDGTEWSWANCNTLCWAIGSVSGAMNEETEKRFLVTVIKDLLGLTEMKRGKDNKAVVASN
IMYIVGQYPRFLKAHWKFLKTVVNKLFEFMHETHEGVQDMACDTFIKIANKCRRHFVALQ
PGENEAFIEEIVRNMRKITCDLSPQQVHTFYEACGHMISAQGQKGLQDRLIENLMSLPNS
AWDTIIAQANQDPSILQDGETIKIVGNIMKTNVAACSSVGTYFYSQLGRIYHDMLSMFRA
SSQLINDAVARDGDIATKTPKVRGLRTIKREILKLIDTYVQKADDMEMVNANIVPPLLEA
VLVDYNRNVPNAREAEVLSVMTTVIQKLHNLMEDKVPLIMESVFECTLEMINKDFHEFPD
HRIQFFKLLQAINLHCFPALLKLDATQFKFVIDSCMWASKHDNREVENTGLTMCLELMNN
MAETDVQTANIFFRQFYIPILQDVFFVLTDSDHKAGFKSQAGLLSRMFYFIEAGKIQDPI
YTPEQAPIGTSNRDFLQKYVADLLQTAFKNLQEIQIKQFVIGLFTFNDDFNKFKTHLRDF
LISLKEFVGDNAELYAEEREQALKDAKAAERDRAMRVGGLLKPSEMDHDDEL |
NT seq |
3219 nt +upstreamnt +downstreamnt
atgtctgtctccatacaggagctggacaccactgtccaggcattttacgagggcaaaggc
gatttgcaaaaacaagcccaacagactctaaccgaattcaaacaaaatccggatgcctgg
ttaattgtgggaaatatacttcaagagtcacaatacccacaaaccaaataccttgcgctc
caagtacttgacgatgtaatcatgacacgatggaaggttctaccgcgggaacaatgccta
ggtatccgcaatttcattgttaattttatcatcgagaactcgaaatccgaggaaaagtta
agaagcgaacgggcgttcttgaacaagcttaacctggtccttgtttctatattgaaacaa
gaatggccgcacaactggccaacctttatcaacgaaattgtttcatcatgccacacaagc
ctctctatctgcgaaaataacatggctatcctccggctgttatctgaagaagtgtttgat
ttctctcaagatcagatgacgtccgtcaaagcaaggaacctgaagacatccatgacacag
gaattctcgtcaattttccaactgtgttctgaagttcttaataccgcaaaccaaccgagc
ctagtcaaggctacattagagacgcttctacgattcttgaactggatccctcttgggtat
attttcgagacgccggtcataaatactctcctgacccgatttttggacgtccccgagttc
cgtaatgtgacccttaagtgcctcacagagattggtggactgcaaattgggcacccatac
aactatgatgagagacttgttcacatgtttacagagactctgacaacagtatcaaaaata
attccgttgtccatggacttgaaacagacctatgcaaagagtaactcgagggaccaagag
tttgtgctcaacctggcattattcctttgcagcttcttcagcgcgcatctcaacgtcgtt
gagaaattacccaaccgggattatctcacgcatgctcacttctatcttatccggattagt
caaatcgacgatagggaggtgttcaaaatctgtttggaatattggactagactagtgcaa
gagctttatgaagagatgcagcaactgccgattacagacatcaaccccttggtgagtatg
ggcgtgagtggtctctccaatggaggagccccacatccgactacccttgcaaactatccc
ctccgcaagcacaaatacgaagaagttctgtcgagtttgcgcaccgtgatgatagaaaag
atggtccgaccagaagaggttctcatcgttgaaaacgaagagggcgagattatacgcgag
tttgtcaaggaaagcgacacaatccagctgtacaaaacaatccgcgagtgcctggtgtat
ctcactcatttggacgtcattgatacagaaaacatcatgatcgagaagctggccaaacag
gttgatgggaccgaatggtcttgggcaaattgcaataccctttgctgggcaattggttca
gtctccggagccatgaatgaagagaccgaaaagcgtttccttgttaccgttatcaaggat
ctccttggcctcacagaaatgaagagagggaaagacaataaagctgtcgtggcgagtaat
ataatgtacatcgtggggcagtatccgcgttttttgaaggcccattggaagttcctgaaa
acagttgttaacaagttgttcgaattcatgcacgagacacatgaaggtgttcaggatatg
gcttgcgacacgttcatcaagatcgccaacaaatgtagaaggcacttcgttgcgctacaa
ccaggagaaaatgaagccttcatcgaagaaatcgtccgcaatatgcggaaaattacctgt
gatctttcaccacaacaggtccacactttttacgaggcttgtggccacatgatatcggcc
caagggcagaagggtctccaggaccgactgatcgaaaatttgatgtcattgcctaactct
gcctgggacaccattatcgcacaagccaaccaagatccttctattctccaggacggagaa
accatcaagattgttggaaacataatgaagacaaatgttgctgcttgctcttctgttggt
acttatttctactcccaactaggccgcatataccatgacatgttgagcatgtttcgggcc
tccagtcagctcatcaatgatgctgtagcgcgtgatggggatattgcgacaaagacaccg
aaagttagaggtcttcggactatcaagagggaaatcctgaaacttatcgatacgtacgtt
cagaaagcagacgatatggagatggtcaacgcgaacattgttccaccgcttcttgaagct
gttctagtggattataaccggaacgtacccaacgcgcgcgaagccgaggtcttgagtgtt
atgacgacagtcatccaaaagttgcacaacctaatggaggataaggtgcctttaattatg
gagagtgtttttgagtgtacattggagatgatcaacaaggattttcacgagttccccgat
cacaggatccaatttttcaaattattgcaagcgattaacctccactgtttccccgccttg
cttaaactagacgccacgcagttcaaattcgtcatcgattcttgcatgtgggcaagcaag
cacgataaccgtgaagttgaaaacactggtctcacaatgtgtcttgagcttatgaacaat
atggctgagaccgatgtacaaacggcgaacatctttttccgtcaattctatatcccaatc
ttgcaagatgtatttttcgttctcaccgacagtgaccataaagcggggttcaagtctcag
gctgggttgctctcacgaatgttttactttatagaagccggcaaaatacaggatcccatc
tacacccctgaacaagcacctatcgggacctccaatagagatttccttcagaaatatgtg
gccgatctcttacagactgccttcaaaaacctccaggaaattcaaattaaacaattcgtc
attgggctttttactttcaacgacgacttcaacaagttcaagacacacttgcgcgatttc
ctgatctccttgaaagagtttgtcggtgacaatgctgaactttatgcggaggaaagagaa
caggctctgaaggacgcgaaggctgctgaacgtgaccgtgcaatgagggttggaggactg
ctgaagccgtcagagatggaccatgatgacgaactatga |