KEGG   Aspergillus puulaauensis: APUU_51153A
Entry
APUU_51153A       CDS       T08081                                 
Symbol
LSM4
Name
(RefSeq) RNA processing protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
apuu  Aspergillus puulaauensis
Pathway
apuu03018  RNA degradation
apuu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:apuu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    APUU_51153A (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    APUU_51153A (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apuu03019]
    APUU_51153A (LSM4)
   03041 Spliceosome [BR:apuu03041]
    APUU_51153A (LSM4)
Messenger RNA biogenesis [BR:apuu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     APUU_51153A (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     APUU_51153A (LSM4)
Spliceosome [BR:apuu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    APUU_51153A (LSM4)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 64976447
NCBI-ProteinID: XP_041558636
UniProt: A0A7R8APY7
LinkDB
Position
5:complement(join(3017759..3017923,3017979..3018170,3018248..3018250))
AA seq 119 aa
MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILREVVQTSPEGDRFFKLPEVY
VRGNNIKYLRIPEEIIEMVKEQQLNQPQHRNRGPREGGRGDRGGRGGRGRGRGRGRGGN
NT seq 360 nt   +upstreamnt  +downstreamnt
atgcttcctcttggccttctaacggccgcgcaaggccaccctatgcttgtcgagctcaaa
aatggcgaaaccttgaacggacacctcgccaattgcgacaactggatgaacttaatactc
agagaggtggtccaaacaagcccagaaggcgaccgcttcttcaagctccccgaagtctac
gtccgcggaaacaacatcaaatacctacggattcccgaagaaatcattgagatggtcaag
gaacagcagctaaaccagcctcaacatcgcaaccgtgggcctcgcgagggtggacggggc
gatcgtggcggccgtggtggtcgcggccgtgggcgcgggcgcggtcggggtggaaactag

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