KEGG   Aspergillus puulaauensis: APUU_60268S
Entry
APUU_60268S       CDS       T08081                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein rad50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
apuu  Aspergillus puulaauensis
Pathway
apuu03440  Homologous recombination
apuu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:apuu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    APUU_60268S (RAD50)
   03450 Non-homologous end-joining
    APUU_60268S (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apuu03032]
    APUU_60268S (RAD50)
   03400 DNA repair and recombination proteins [BR:apuu03400]
    APUU_60268S (RAD50)
DNA replication proteins [BR:apuu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    APUU_60268S (RAD50)
DNA repair and recombination proteins [BR:apuu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     APUU_60268S (RAD50)
    BRCA1-C complex
     APUU_60268S (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     APUU_60268S (RAD50)
SSDB
Motif
Pfam: SbcC_Walker_B APG6_N AAA_23 ABC_tran_CTD YwqJ-deaminase
Other DBs
NCBI-GeneID: 64977225
NCBI-ProteinID: XP_041559414
UniProt: A0A7R8AS13
LinkDB
Position
6:join(626780..630403,630466..630474)
AA seq 1210 aa
MVATRSLQLTVKKTTRQQKTLEGQLLMVKEGERTAISSRVAELDQIMPQYLGVSKAILDS
VIFCHQDESLWPMSEPSVLKKRFDEIFEAIKYTKAIDNIKVLRKKQTEELAKYKIMEQHA
KEDKEKADKAEKRSIKLQEEIEALRDETQQLTKEMRRVAELADKAWKESESYAQVLGALE
GKRIEAKSVQSTIDNLKRHLVELDEPDEWLESNLEQFEAKQIQYQQQEESQKEKYMEIRE
QIEETRHKLGLKQAEYGKHENDKANFERQVERRQRMSKDLARNHSIRGFDRIVDQSDVDE
FMKRIRKILKEQSQTLDRAKRDAQSELREAQTSLNQIGERKSALQESKNAAKRQIAANDK
EAASYQTKLNEISVDEGAQAALESNVEDIQSRLDQAKERGRSASWDKEIQELNSEIHKQE
DESSRLNAELIESTKKAGDLARLDHLKKELKERERSLETMKGAHGERLSKLVDQDWKIDT
LEQDFQRTLEDESKEVSNAERARDGVSRELEQVEYRLNNTKKSLENRQKELKECIEEIRE
AIDDEPEEYSEVVNQRQSQLDMARKDAEQYAGIGEYMSTCLKTAQDAKVCRLCSRPFRND
NELKAFWKKLETLVQKAKRDSEEEEVRQLEEDLNNARAANTAYDTWSRLKQTEIPELRQE
EDNYVLQRDELLGQLEDRDKVVSEVGEKKRDVDALSKTVSTIVRYDSEIKSIRSQIQELS
SKEQEVATPRTLEDIQDEIASIGEKSRALKKTLSKLTNEKEQARSELNNLELQLRDVKSS
LDNVKFQLERKTDLISRIEEYKSLNGQQREAIAKADKDIEDLNPELLKYQAKYDDISQRA
EAREREMQQATSKLSDSIHQIELANEEIDAYNERGGPGQLDRSKRELETIEGEIGHLETE
QADITKTINRISAQLKDSENTKRQYADNLTYRQSTRTLDKVASEIEELEAQNAEVDRSRF
KEESERRSREHNALSAKQSSKMGEMKSKDDQLLQLLTDWNTDYKDAAYKYKESHIKVETT
KAAVEDLTRYGSALDKAIMKYHGLKMEEINAIIGELWQKTYRGTDVDAILIRSDNENAKG
NRSYNYRVCMVKQGAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLD
RDNIRSLAESLHDIIRARQQQANFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNERQKSI
IERQSIAEVM
NT seq 3633 nt   +upstreamnt  +downstreamnt
atggttgcgactaggagcctccagctcacggttaagaaaacaacccggcagcaaaagaca
cttgaaggtcaacttctaatggtcaaggaaggagagaggacagcaatttcctcccgagta
gcagagctggatcagattatgcctcaatatctgggtgtgtccaaagctatccttgattca
gtcattttctgtcatcaggatgagagtttgtggcccatgagtgaaccttccgtcctgaaa
aagaggttcgacgaaatattcgaagcaatcaagtacacaaaggctattgacaacatcaag
gtgctgcggaaaaagcaaactgaggagcttgcgaagtacaaaatcatggagcagcatgct
aaggaagacaaagaaaaagctgataaggcggagaagcggtccattaaattacaggaggaa
atcgaagcgctacgagacgagacccagcagctcaccaaggaaatgcgtcgggtcgcagag
cttgcggacaaagcatggaaagagtccgaaagctacgctcaagttcttggtgctctagaa
ggcaaacggatcgaggcaaagagcgtccaatctaccattgacaatcttaaacgacacttg
gtagaacttgacgaaccagatgaatggttagaatcgaacctagagcagtttgaggcgaaa
caaattcagtaccagcagcaagaagagtcccagaaagagaagtatatggaaattagggaa
cagattgaagaaactcgccacaagctgggtctcaaacaggctgaatatggaaagcacgaa
aatgacaaggccaactttgaacgtcaggtcgaacgacggcaacgaatgtctaaggacctt
gcgcgaaatcacagtatccgcggctttgaccgcattgtggatcaatcagatgtggatgaa
ttcatgaagagaatacggaaaattctcaaagagcagtctcagactttggaccgagctaaa
agagacgcgcagagtgagttacgtgaagcacagacgtctctgaatcagataggcgagcgc
aagtccgcgttgcaagagagtaagaatgcagccaaacgccaaatagctgccaacgacaag
gaggccgcaagttatcaaaccaagctgaatgaaataagcgtggacgagggtgctcaggcc
gcccttgagtctaatgttgaagacatccagtctcgcctagaccaagccaaggagcgcgga
cgttctgcttcctgggacaaggagatccaggaattgaactccgagatccacaaacaagaa
gatgaaagttctcgcctcaatgcagagctcatcgaatcaaccaagaaagctggcgatctg
gcccggttagatcacctaaaaaaggaactgaaagagcgcgagcgaagtttggagacgatg
aagggtgcgcatggtgagcgcctttcgaagcttgttgaccaagactggaaaatcgatacc
ctagagcaggactttcaaaggactctcgaggatgaatccaaagaggtgtctaacgccgaa
cgtgcgcgggacggcgtcagccgagaacttgagcaggttgagtacagactgaacaacacc
aagaagtctctagaaaatcgtcaaaaagagctcaaggaatgcatagaagagattcgcgaa
gctattgatgatgagcctgaagaatactccgaagttgtcaaccagcggcagagtcaattg
gacatggcgagaaaagacgccgagcagtatgccggtattggagagtacatgtctacatgt
ttgaaaactgcgcaagatgcgaaagtgtgtcgactatgcagtcggccgttcagaaacgac
aatgagctgaaagccttttggaaaaagcttgaaacattagtacagaaagccaagcgcgat
tcggaggaagaggaggttcgacaactggaagaagatctcaataacgcccgtgcagccaac
actgcttacgatacatggtctcgcctcaagcaaacagagattccagagttgcgacaagaa
gaagacaactatgttctacagcgcgatgagctcctaggtcaactggaggaccgtgacaaa
gttgtcagcgaggtgggcgagaagaaacgtgatgtcgacgctctctccaaaacggtcagc
actatcgtcaggtatgatagtgagataaagtccattcgctcccagatacaggagctttca
tcgaaggagcaggaggttgcaacgccgcgtacactcgaggatatccaagacgaaatagcc
agcattggcgagaaatcaagggcacttaagaagactctttcgaagcttacgaacgagaaa
gaacaggcccgttctgagctcaacaatctggagctgcaactccgagatgtgaaaagcagc
ctcgacaatgtcaaattccagcttgagaggaagactgatctgatatctcgcatagaagag
tataagagcctcaatggtcagcagcgggaagccattgcgaaagcagacaaagacattgag
gatctaaatccagagttgctaaaatatcaagcgaagtatgatgatatcagtcaacgagca
gaagcgcgcgaaagagagatgcaacaggcaacctcaaaattgtctgatagtatacaccag
atagagctcgccaatgaggaaatcgacgcatacaatgagcgaggtggaccgggtcagctt
gatcgaagcaaacgcgaactcgagaccattgagggcgaaatcggccacctcgaaactgag
caagcggatataaccaaaacgattaacaggatctctgcgcagctcaaggacagcgagaat
acaaaacgtcagtatgctgataacctgacatatcgacagtctacacgaaccctcgacaag
gttgcgagcgagatcgaggaactggaagcccagaatgcagaagtcgatagaagtcgattc
aaggaagagtcagagcgccggtctcgcgaacacaatgcgctgtccgcaaagcaatccagc
aaaatgggagagatgaagtccaaagacgaccagttgctgcagcttctaacggattggaac
acggactacaaagacgccgcttataaatacaaggaatcgcatatcaaggtcgaaactacc
aaggccgcagtcgaagatttaacccgttacggaagtgcccttgacaaggccatcatgaag
taccatgggctgaaaatggaagaaatcaacgccatcatcggcgaactctggcagaagacg
taccgcggcacagacgttgacgcaatcctcatccgctccgataatgaaaatgcaaagggt
aaccggtcttacaactaccgagtctgcatggtcaagcagggtgcagaaatggacatgcgc
ggtcgctgcagtgcgggccaaaaagtccttgctagtatcattatccgcctagccctcgcg
gagtgttttggcgtgaactgtggtctaatcgcgctcgacgaacctactaccaaccttgat
agagacaatattcggtccctggccgagtcgctccacgacattattcgcgcccgccagcaa
caggcaaacttccagcttatcgtgattacccacgacgaggaattcctgcgccacatgcag
tgcggtgatttcagcgattactactaccgcgtttctcgcaatgagaggcagaagtcgatt
atcgaaaggcagtccattgcagaggttatgtga

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