Aspergillus puulaauensis: APUU_70612S
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Entry
APUU_70612S CDS
T08081
Symbol
MTR4
Name
(RefSeq) ATP-dependent RNA helicase mtr4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APUU_70612S (MTR4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apuu03019
]
APUU_70612S (MTR4)
03041 Spliceosome [BR:
apuu03041
]
APUU_70612S (MTR4)
03009 Ribosome biogenesis [BR:
apuu03009
]
APUU_70612S (MTR4)
03016 Transfer RNA biogenesis [BR:
apuu03016
]
APUU_70612S (MTR4)
Enzymes [BR:
apuu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
APUU_70612S (MTR4)
Messenger RNA biogenesis [BR:
apuu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
APUU_70612S (MTR4)
Spliceosome [BR:
apuu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
APUU_70612S (MTR4)
Complex C
U4/U6.U5 tri-SnRNP related factors
APUU_70612S (MTR4)
Ribosome biogenesis [BR:
apuu03009
]
Eukaryotic type
Pre-60S particles
Helicases
APUU_70612S (MTR4)
Transfer RNA biogenesis [BR:
apuu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
APUU_70612S (MTR4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
AAA_16
Motif
Other DBs
NCBI-GeneID:
64979039
NCBI-ProteinID:
XP_041561228
UniProt:
A0A7R7XX39
LinkDB
All DBs
Position
7:join(1637284..1638112,1638165..1639226,1639280..1639875,1639928..1640493,1640556..1640736)
Genome browser
AA seq
1077 aa
AA seq
DB search
MDELFDVFEDQPQAAKPSESVPRRPKKEKSKKRQVNGDVKENVDKPEPKESATTADVADR
DVEEENASRSDNNNQPDAKRLRLEEEPEPVVADLFETAQEREIAGSVGLQAEKDAGSVVL
SHQVRHQVAIPPKYPYVPISQHKAPENPARVWPFTLDPFQQVAVSSIERGESVLVSAHTS
AGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYREFAADFGDVGLMTGDVTINPTATC
LVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDATRGVVWEETIILLPDKVRYVFLSA
TIPNAMQFAEWIVKMHNQPCHVVYTDFRPTPLQHYFFPAGSEGMHLIVDEKGAFREENFQ
KAMSSIADKKGDDPSDALAKRKGKGKDKKLNKGGNQDRDDIYKIVKMIMLKSLNPVIVFS
FSKRECEFYALKMRSLAFNDDSEKEMVSKVFNSAIEMLSEEDRNLPQIQNILPLLRRGIG
VHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKFDGFSQRWVT
PSEFVQMSGRAGRRGLDDRGIVIMMIGEEMDPAVAKEIVRGEQDRLNSAFHLGYNMILNL
MRVEGISPEFMLERCFYQFQNTAGLAGLEKELAESEEKRANMTIPDEGTIREYYDIRTQV
DQFNDDVRAVISHPTYSIAYLQPGRLVHIKYKEFDFGWGIVVNNKKRKPPKNSTQEFSDH
EAWVVDVLLKVADGSSIGTQTFEDLPQGVRPPKEGEKYQTAVVPLLLNCVQAISHVRIFP
PKDLQTANARDSMGKKVDEVKRRFPDGIAVLDPIEDMGIKDDEFKKTLRKIEVLESRLVS
NPLHNSPRLEELYNQYSEKVDLGNKIKATKKKISEGMAIQQLDELKCRKRVLRRFGFINE
AEVVQLKARVACEISTGDELMLSELLFNGFFNKLTPEQAASVLSVFVFEEKTKETPALSK
DELSKPLKEIQAQARIVAKVAQESKLAVSEEDYVQSFHWELMEVIYEWANGKSFADICGM
TDVYEGSLIRVFRRLEECLRQMAQAAKVMGSEELESKFETALTKVRRDIVAAQSLYL
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcttttcgatgtcttcgaggaccagccccaggcggccaagccctccgaatct
gtaccccgacgaccgaagaaagaaaagagcaagaagcgccaggtaaatggtgatgtgaag
gaaaatgttgacaagccggaaccaaaggagagcgcaactactgccgatgtcgccgatcgg
gatgtcgaggaagagaatgcttcacgctcggataacaacaatcaacccgatgcgaaacga
ttgcgactagaagaggagccggaacccgtagttgcggatttgtttgaaacggcgcaagaa
cgagagatcgcaggttccgtgggacttcaagctgagaaagatgccggttctgtggtattg
tctcatcaggtccggcatcaagtcgccattcccccaaaatacccatacgtgcctatttct
caacacaaagcccccgagaaccccgcaagagtgtggccattcaccctcgatccattccag
caggtcgctgtctcatcaatcgaaagaggggaaagtgtgctagtttcggcccataccagt
gcgggtaagacagtggttgcggaatatgctattgcgcagagtttgaagaacaatcaaagg
gtcatctacacgagtccaatcaaagctctgagtaaccaaaagtatcgagagtttgccgca
gactttggcgacgttggtctaatgaccggagatgtgactatcaaccctaccgctacttgc
ttggtcatgacgacagaaattctgcgatccatgctgtaccgcggctctgagatcatgcgc
gaagtcgcctgggtgatctttgacgaaatccattacatgcgagacgccacgcgaggtgtt
gtttgggaagaaacgatcattctactccccgataaggtccgatacgtgtttttgtctgct
acgatacccaacgccatgcagttcgcggagtggattgtcaaaatgcacaaccagccctgt
cacgttgtatataccgattttagacctacaccactacaacactatttcttccccgctggt
tctgaaggaatgcatctgattgtggatgaaaagggcgcttttcgggaggagaactttcaa
aaggccatgagctccatcgcagacaagaagggagacgacccgtcggacgcgctcgccaag
cggaaaggaaagggcaaagataagaagttaaacaaaggcggaaatcaagatagagatgac
atctataagatcgtcaagatgatcatgctcaagagcctgaatcctgtgatcgtcttcagt
ttcagcaagcgtgaatgcgagttctatgctctgaaaatgaggagcttggcgttcaacgac
gactccgagaaggagatggtctccaaggttttcaacagcgcgattgaaatgctgtcagag
gaggacagaaacttgcctcaaattcaaaacatcctaccccttcttcgcagaggtatcggc
gttcatcattctgggcttcttcccattcttaaggaaaccatcgaaatcctgttccaagag
ggacttatcaaggtccttttcgcgacagaaacattctccatcggtctcaacatgcccgcc
aaaactgtcgtcttcactagcgtccgaaagtttgacggtttcagccagcggtgggtcact
ccatctgaatttgtgcaaatgtcaggccgcgctggtcgaagaggtcttgacgaccgtggt
attgtgatcatgatgataggcgaggaaatggaccctgctgtggccaaggaaattgttcgt
ggagagcaggaccgtttgaattccgcgttccatttgggatacaatatgatcctcaatcta
atgcgcgtggagggtatctcaccagagtttatgttggaaaggtgtttctatcaattccag
aacactgctggtctagcaggacttgaaaaggaacttgctgagtcagaggaaaagagggca
aatatgactattccagacgaagggacgattcgtgaatattacgatattcgaacccaggtt
gaccagttcaatgacgacgtacgagcggtcatcagtcatcctacgtattccatagcctat
ctccagcctgggcggttggttcacatcaagtacaaagagtttgatttcggctgggggatt
gttgtaaacaacaagaaacgcaaaccaccgaagaactccacgcaggaatttagcgatcat
gaggcctgggttgttgatgttcttttgaaagttgccgacggatcatctattggcacccag
acattcgaagatctgccacaaggtgtgcgccctccaaaggaaggcgaaaaataccaaacc
gcggttgttccgctccttctcaactgcgttcaagccatctcacatgtgcggatcttccca
ccaaaagacttacagaccgcgaatgcgcgggattctatggggaagaaagtggatgaagtt
aagcggcggttccctgatggtattgctgttctcgacccgatcgaagatatgggaattaag
gatgatgaattcaagaaaacgttaaggaaaattgaggtcctcgagtctcgtttggtctca
aatccactgcacaactctccgcgattggaggagttgtataatcaatattcagagaaggtg
gatttggggaacaagatcaaagcgaccaagaagaagatatccgaaggcatggcgatacag
caactagatgaactgaaatgccgaaaacgagttcttcgccgcttcgggttcatcaacgag
gccgaagtcgtgcagctgaaagcacgtgtggcatgtgaaatcagcaccggcgacgagttg
atgctcagtgagcttcttttcaacggcttcttcaataagctcaccccggagcaagcagcg
tccgtattgagcgtattcgtatttgaagaaaaaacaaaggagacgccggcgctgtctaag
gatgagctttcgaaacccctcaaggagatccaagcgcaagcacggatcgtcgccaaagtc
gcacaggagtcgaaactagcagtcagcgaagaagattacgttcagagcttccactgggaa
ctcatggaagttatttacgaatgggctaacgggaaatcatttgctgatatctgcggtatg
accgatgtttacgaaggcagtttaatccgtgtcttccgtcggttagaagagtgtctgcga
caaatggctcaggcagccaaggttatgggcagcgaggagcttgaaagtaaatttgagaca
gcgttgacaaaggttcgcagggacattgtcgccgctcagtccctgtatctgtag
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integrated database retrieval system
