Aspergillus puulaauensis: APUU_70788S
Help
Entry
APUU_70788S CDS
T08081
Symbol
NOT5
Name
(RefSeq) general negative regulator of transcription subunit 5
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APUU_70788S (NOT5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apuu03019
]
APUU_70788S (NOT5)
Messenger RNA biogenesis [BR:
apuu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
APUU_70788S (NOT5)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
APUU_70788S (NOT5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
WKF
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
64979215
NCBI-ProteinID:
XP_041561404
UniProt:
A0A7R7XYE6
LinkDB
All DBs
Position
7:join(2115108..2115362,2115430..2116967,2117060..2117120)
Genome browser
AA seq
617 aa
AA seq
DB search
MTSRKTQQEIDKTFKKVAEGIQTFEGIYEKIRVANNPTQRDKLEENLKREIKKLQRYRDQ
IKSWASGNEVKDKGPLLEQRRAIETCMEQFKAVEKEMKTKAYSKEGLSAASRLDPKDKEK
VETCDFLSNMVDELQQKIEAMEAEEESLQMSMKKNKKDVAKNNRLADLAHFIERHKWHVN
KLELLLRSLQNGNIETAPVADLKESIKYYVEDGNNIDYSGEDETLYDDLNIGDDAEAPFG
AGDNVSSQDAQSMQDEEIEPKPKAKPEVTATSNRRPSAQMKSPLPVLAALHPSSSSSSTS
GMKPAPPPTRLPGETLKYASAAAAAAASDKNGVGIAPLPPPPGASPAFPAAVPASKASST
ASPVVSLAQPVSKATPTAAIVAEEGRSRTPAFSPKVPAAVSASNTVPTTPAMDKAETAAT
KPRAAANGEQFGKENQQWEDREESIYHLPPGLQDLIHSFEVTKSRASANPSSQPPSVQRL
LTASAANCPEPGDSEKPRHYKPQNPYNTPLYYPQEPLAILDDPRLYETGRIDTDTLFYLF
YYRQGSYQQYLSAKALKNQSWRFHKQYQTWFQRHEEPKTITEEFEQGTYRFFDYESTWMN
RRKADFKFVYKYLEDEL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccgcaagacgcagcaggagatcgacaagaccttcaagaaagtcgcggagggt
atccagacgttcgaaggcatctacgagaagatccgtgtcgctaacaatcccacacaacgt
gacaagctcgaggagaacctgaaacgagagatcaagaagcttcaacgatatcgtgatcag
atcaagtcatgggcatccggcaatgaggtcaaggataaagggccgctgcttgagcagcga
agggccattgagacatgcatggaacaattcaaggctgtcgaaaaggagatgaagacgaaa
gcatattccaaagaaggcctatctgcggcgtcacgactcgatccgaaagacaaagaaaag
gtcgagacctgcgattttctgtccaacatggttgatgagttgcaacagaaaatagaggca
atggaggcagaagaagagtcgcttcaaatgtcgatgaagaaaaacaaaaaggacgttgcc
aaaaacaaccgcctggcagaccttgcacatttcatcgaacgtcacaaatggcacgtaaat
aagctggaattattgctacgatcactccagaacggcaatatcgaaacggccccggtggcg
gatctcaaagagagcatcaaatactacgtggaggatggtaacaacattgactactctggg
gaggatgagacgctgtacgacgatctgaatataggcgacgacgccgaagcaccattcgga
gcgggtgacaacgtatcgtcgcaagatgctcagtcaatgcaggatgaggagattgaaccc
aaacccaaggccaaacccgaagtcactgcaacgagcaatcgcagaccctctgcccagatg
aagtccccgcttccagttctggcagccctgcatccgtccagctccagcagctcgacatct
ggcatgaaacctgcacctcctcccacgcgtctgcccggtgaaacgctcaagtatgcgtct
gcagcagcagctgctgctgcaagcgataaaaatggcgtgggaatcgccccgctgccgcct
cccccaggtgctagtcccgccttcccagctgcagtgcccgcctcaaaagcttcctctacc
gcctcacctgttgtgtcactagcacagcctgtgtcaaaggctacacctacagcagcgata
gttgcagaggagggccgttcgcggacgcctgctttcagtcccaaggttccagctgccgtc
agtgcgtcaaatacggtaccgacgacgcctgcgatggacaaggcagaaaccgccgccacg
aaaccacgagccgctgccaacggagagcagttcggtaaagagaatcagcaatgggaagat
agagaagagtctatctaccacctgccccctggtctgcaagatttaatccattcgtttgaa
gttaccaaaagtcgcgcatcggccaatccctcaagtcagccaccttcggtgcagcgcctt
ctcacggcatcagcagccaattgccccgaacctggggactcggaaaagccgcgtcactac
aagccccagaacccgtacaacacgcctctctactacccgcaagagccacttgccatcttg
gacgaccctcgtctctatgaaacagggcggatcgacacggacaccctgttttatttgttc
tattatcgccagggttcctaccaacagtacttgtcggcaaaggcattgaagaaccagagc
tggagattccacaagcagtaccagacatggttccagcgacatgaagaacccaagacgata
accgaggagttcgaacaaggtacatatcgcttcttcgactatgagagtacttggatgaac
cgacgcaaggcagatttcaagtttgtctacaagtacctggaggacgagttgtag
DBGET
integrated database retrieval system
