KEGG   Aspergillus puulaauensis: APUU_80359A
Entry
APUU_80359A       CDS       T08081                                 
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
apuu  Aspergillus puulaauensis
Pathway
apuu03018  RNA degradation
apuu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:apuu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    APUU_80359A (LSM2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    APUU_80359A (LSM2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apuu03019]
    APUU_80359A (LSM2)
   03041 Spliceosome [BR:apuu03041]
    APUU_80359A (LSM2)
Messenger RNA biogenesis [BR:apuu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     APUU_80359A (LSM2)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     APUU_80359A (LSM2)
Spliceosome [BR:apuu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    APUU_80359A (LSM2)
 Complex C
  U2 snRNP components
    APUU_80359A (LSM2)
SSDB
Motif
Pfam: LSM LRR_9 Hfq
Other DBs
NCBI-GeneID: 64980053
NCBI-ProteinID: XP_041562242
UniProt: A0A7R8AT41
LinkDB
Position
8:complement(join(922781..922812,922881..923131,923202..923215))
AA seq 98 aa
MLFFSFFKTLTNQVVTIELKNDIRIRGTLKSVDQYLNIKLDDIDVLDLDKYPHLSSVKNM
FIRGSVVRYVMLPRSEVDVGLLEDATRREAANQAGKAR
NT seq 297 nt   +upstreamnt  +downstreamnt
atgcttttcttcagtttcttcaagaccctcacgaaccaggtcgtcacgatagaactcaag
aatgacatccgaatccgcgggactctgaaatcagtcgaccaatacctcaacatcaagctc
gacgatatcgatgttttagacttggacaaatacccgcatctatcgtcggtaaagaacatg
ttcatccgtggcagcgtggtgcggtatgtgatgctgccgcggtcggaggttgatgttggg
cttttggaggatgcgacacggagagaggccgcgaaccaggcgggtaaagctcggtga

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