Aspergillus puulaauensis: APUU_80628A
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Entry
APUU_80628A CDS
T08081
Symbol
RFA1
Name
(RefSeq) replication factor A protein 1
KO
K07466
replication factor A1
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03030
DNA replication
apuu03420
Nucleotide excision repair
apuu03430
Mismatch repair
apuu03440
Homologous recombination
apuu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APUU_80628A (RFA1)
03420 Nucleotide excision repair
APUU_80628A (RFA1)
03430 Mismatch repair
APUU_80628A (RFA1)
03440 Homologous recombination
APUU_80628A (RFA1)
03460 Fanconi anemia pathway
APUU_80628A (RFA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apuu03000
]
APUU_80628A (RFA1)
03032 DNA replication proteins [BR:
apuu03032
]
APUU_80628A (RFA1)
03400 DNA repair and recombination proteins [BR:
apuu03400
]
APUU_80628A (RFA1)
Transcription factors [BR:
apuu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
APUU_80628A (RFA1)
DNA replication proteins [BR:
apuu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
APUU_80628A (RFA1)
DNA repair and recombination proteins [BR:
apuu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
APUU_80628A (RFA1)
MMR (mismatch excision repair)
APUU_80628A (RFA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
APUU_80628A (RFA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
64980322
NCBI-ProteinID:
XP_041562511
UniProt:
A0A7R8AUX7
LinkDB
All DBs
Position
8:complement(join(1613218..1613311,1613368..1614260,1614314..1614854,1614900..1614990,1615056..1615207,1615271..1615311))
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AA seq
603 aa
AA seq
DB search
MASQASHISVGALSAIFDGTKPQFNEPIVQCVQVKPLPPQTNNQERYRVVFSDVSNYVQT
MLAIQANHFVTDGLLRKGCFVKLKQFQANSVKGKKILIILDLEVLKDLGEAEKIGEPKPL
ENKLEEDEKPQSTTISSNGFYGAKPQNAPSQVNSRPQQMRPVQGPATATIYPIEALSPYA
NKWTIKARCTSKSPVKHWHGRSGDGTLFSVNLLDDSGEIRATGFNDQCTALYDLFQEGGV
YYISSPCRVQIAKKQFTNLNNDYELTFERETLVEKAEDQNDVPQVRFNFTTIGDLQSVEK
DTTIDVIGVLKDVGDTTQIVSKTTKKPYDKRELTLVDNTGFSVRLTIWGTTAMNFGATLE
SVVAFKGVKVSDFGGKSLSLLSSGSVTVDPDIEEAHRLKGWYDAQGRDESFASHAPSTGA
MSGMKRDRFKTIAQVREEQLGMSEEPAYFSLRATVVYIKQDNLCYPACLSEDCNKKVTEL
DPGQWRCERCDKTHPRAEYRYIMLINVSDHTGQLYLNCFDDVGRLMMDTSADQLMEMQQN
DDKLVGDIIQNANCRTWTFGCRARIDHYGDQQRIRYQVSFARPVNYSEEASRLADMIDSY
NLS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcaagcgtctcatatatctgtaggagcgcttagtgcgatctttgatggcaca
aagcctcagtttaatgagcctatcgtccaatgtgtccaagtcaagccgttgccaccccag
acaaacaaccaagagcgttatagggttgtgtttagcgatgtatcaaactatgttcagacg
atgcttgcaatccaggcaaatcattttgtgacagatgggttacttcgcaaaggatgcttt
gtgaagctgaagcagttccaggccaactcggtcaaagggaaaaaaattcttatcattctt
gacctcgaagttctcaaggacttaggggaagcggagaaaatcggcgagccaaaaccattg
gagaacaaactggaggaggatgagaagccacagtctacaacaatatcgagcaacgggttt
tacggtgccaaaccccaaaatgcaccttcacaagtcaactcacgaccgcagcaaatgcgt
cccgtgcagggtcctgcaaccgcaactatttaccccatagaggccctctccccctatgcc
aataaatggacgattaaagcgcgctgcactagcaaatctcctgtcaagcattggcatgga
agaagcggcgatggcacgcttttcagtgtcaatttgctagatgatagtggcgaaatacgc
gccaccgggttcaatgaccaatgcactgctctgtatgatctgtttcaagaagggggcgtt
tattacatatctagcccatgccgtgttcagatcgctaaaaagcagtttacaaaccttaac
aatgactatgagcttacctttgagcgagaaaccctggttgagaaggcggaagaccagaat
gatgttcctcaagtgcgctttaacttcaccactattggggatctacagtctgttgagaaa
gataccacaatcgatgtgataggagtgttgaaagatgtcggggataccacccaaatcgtg
tcaaaaacaacaaagaaaccctatgataaacgtgaacttactttggttgacaacacaggg
ttctcagtccgtttgactatatggggcactacggcgatgaactttggcgctacactagaa
tctgtggtggcgtttaagggcgttaaagtttctgactttggcgggaagagcttgagttta
ctcagttcgggctctgtgaccgtggatcccgatattgaagaagctcatagactaaaaggc
tggtatgacgcgcagggtagggacgaaagttttgcctctcatgctccatcgaccggggcg
atgtccggaatgaaacgcgatcgattcaagacgatcgcacaagttcgagaggagcagctt
gggatgtcagaggaaccagcgtatttttcgctcagagccactgtcgtctacataaagcaa
gacaacctgtgttacccagcatgcctttcagaggattgcaacaagaaagttacagagctt
gatcctggccagtggcgatgtgagcgctgtgataagacacacccgcgagcggaatatcga
tatataatgcttattaacgtcagcgaccatactggacagctgtatctcaactgttttgat
gatgttggccgattaatgatggatacaagtgcagatcaactaatggaaatgcaacagaac
gacgacaaattagttggtgacatcatccaaaacgccaattgccgtacctggacttttgga
tgcagggcaagaatagaccattatggggaccagcaacgtattcgatatcaagtgtcgttt
gcaagacccgtcaactactctgaagaggcctcacgtctcgcagatatgatagacagctac
aatctgtcctag
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