Aspergillus puulaauensis: APUU_80682S
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Entry
APUU_80682S CDS
T08081
Symbol
TFB2
Name
(RefSeq) RNA polymerase II transcription factor B 52 kDa subunit
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03022
Basal transcription factors
apuu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
APUU_80682S (TFB2)
09124 Replication and repair
03420 Nucleotide excision repair
APUU_80682S (TFB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apuu03021
]
APUU_80682S (TFB2)
03400 DNA repair and recombination proteins [BR:
apuu03400
]
APUU_80682S (TFB2)
Transcription machinery [BR:
apuu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
APUU_80682S (TFB2)
DNA repair and recombination proteins [BR:
apuu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
APUU_80682S (TFB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
64980376
NCBI-ProteinID:
XP_041562565
LinkDB
All DBs
Position
8:join(1845891..1846014,1846082..1846169,1846239..1847463)
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AA seq
478 aa
AA seq
DB search
MAAAPSRPFDYLESLPGTVFFKLYQQPSTALAIFRRMLPDLAKCFVMALLYLKDPLPAAD
LEIWVRSESLKERDSALSILGRLHILSNTTTAANVRAYMVTDPFAVSLRQALTGAEKTQS
FGVLYRLSDAENVSISDLDDYARRQWEGVLGYMVGTSGLGIQRDANLSKGVKQLLQAGHL
VEIRDRRVEITQDGFAFVLQDVGTQVWHILILYVESAEAIGMDSVEVLSFVFLLSSLELG
KSYEKKHLTSNQLRTLTDLADFGIVYQDSPEASHFYPTRLATTLTSDSSALGNPIAGTLS
GPVGADSNQPGSGFIIIETNYRLYAYTSSPLQISLIALFTTLKYRFPNLVTGKVTRQSIR
RAIEMGITADQIVSYLATHAHPQMRKHNASRSTSNQAGIPPSVLPPTVVDQIRLWQLERD
RVRATAGFLFKDFVSLAEYEAPCRYAEEIGVLIWKSDRQRRFFVTRHEQVAAFLRSRK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccccgtcacgtccgtttgattatctcgaaagccttcccggaacggtcttc
ttcaagctctaccaacagccctctaccgctcttgctatcttcaggcgcatgctgcctgac
ctggcaaaatgcttcgtgatggcgctcctctatttgaaggatccgcttccagcggcggac
ttggagatttgggtgagatctgagagcttgaaggaacgggatagcgccctttcaatccta
ggaagactacacatcctttcgaataccacaactgcggccaacgtccgcgcttacatggtc
accgacccattcgcagtttcacttcggcaagctcttacaggtgctgaaaaaacacagtcg
tttggggtgctttaccgattatcagatgcggagaatgtctcgatctcggatcttgatgac
tatgcgcgccgacaatgggaaggggtgcttggttatatggttggcaccagtgggctcgga
atacaacgcgatgcgaacctgagtaaaggcgttaaacaacttttacaggccggacatctg
gtggagatcagagatcgccgcgtcgaaattactcaagacggattcgcgtttgtccttcaa
gatgtaggcacccaagtctggcatatcttgattctatacgttgagagtgcggaagctatt
gggatggatagtgttgaagtgctttcctttgtatttctcctcagcagtctggaactcggc
aaatcgtacgaaaagaaacatttgacatcgaaccaacttcgcactctaaccgatttagcg
gattttggcatcgtctatcaggattctcccgaagcgagccatttttatcccactcgtctt
gcgaccacccttacatcggactcaagtgcgctgggaaatccaatagccggcacactctct
ggccccgtcggggccgactctaatcaacctggctctggattcattatcattgaaacaaac
taccgactttatgcatacacatcttcaccgcttcaaatctctcttattgcattgtttacg
actcttaagtatcgttttcctaacctagttacgggtaaggtcactcggcagtctattcgc
cgggcaattgaaatgggtatcacggccgatcaaattgtttcatacctggctacacatgca
cacccgcaaatgcgcaagcacaatgcgtctcggtccacatccaaccaagccggtatcccg
ccatcggtccttccgcctacggttgtagaccagattaggctttggcagctggagcgcgac
cgtgttagagccacggccggctttttgttcaaggattttgtcagcctggccgaatacgag
gccccgtgtcggtacgctgaagagatcggggtgcttatatggaagtctgaccgccaaaga
aggttcttcgtgactagacatgaacaagttgcggcgttcctacgaagcaggaaatga
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