Lancefieldella parvula: Apar_0382
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Entry
Apar_0382 CDS
T00983
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apv
Lancefieldella parvula
Pathway
apv03420
Nucleotide excision repair
apv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Apar_0382
03430 Mismatch repair
Apar_0382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apv03400
]
Apar_0382
Enzymes [BR:
apv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Apar_0382
DNA repair and recombination proteins [BR:
apv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Apar_0382
MMR (mismatch excision repair)
Other MMR factors
Apar_0382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACV50813
UniProt:
C8W9M5
LinkDB
All DBs
Position
443825..446263
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AA seq
812 aa
AA seq
DB search
MQIDLEGLNPAQHQAVMTTQGPLLVLAGAGSGKTRVLTFRIAHMIADEGVRPWQVLAITF
TNKAAAEMRERLEALLPNNIRGMWVCTFHAMCVRLLREDGDRLGYGPNFAIYDDDDSKRL
VKAILSDLDIDVRQFPLNSIRSKISAAKNALLYPDDVEAQAASPMDHVVARVYRALQTRL
DKANAMDFDDLLIKAFELLSKYPDVLAKYQERFRYINVDEYQDTNGVQYAITKLLASKYR
NLMVVGDDDQSIYSWRGADIKNILAFEKDYEEAVVVKLEQNYRSTGHILAAANAVVAHNS
HRKPKRLFTDEGDGEKIQVYQASDERDEGAWIGSEIEKLHDKGMSYDSIAVFYRTNAQSR
ILEDMLLRAGVPYKIVGGTRFFDRAEIRDVMAYLKVVVNPDDDMAAMRVINTPRRGIGAT
SIQKIQTYALHNGLSFFSACEACVMEESLLTAKVRNALVEFTSAIEHGRHIDGELDEVVE
AIIDRSGLIRALEAEHTIEADGRIENIREFFGVAAEFDESHDDVEETLESLQQLREAGVL
DAQDAASLNATGFNAATGTLSSVAVSPTPTSQEENLHPQVVAEKLPAFMEWLALRSDLDS
MDGSTSAVTLMTIHSAKGLEFPAVFVAGMEEGIFPHANYEAEAAQLEEERRLAYVAITRA
RKRLYLTYASTRRTYGSVQANPVSRFVGEIPQEHVKAIGVGSAGFSGVGWAKRGDRHGTF
GSGRGSEVYGGNVFGSRTRSTGGSQAPRPAPIQKDPVRASASFAVGDQVSHKTFGPGIVL
AVQGDTIEVKFTRTNKTKKLMKGFAPIVKIEG
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgatcttgaaggtttgaatcctgcccagcaccaggcagttatgacaactcaa
ggaccacttttggttcttgcaggagctggttcgggtaagactcgcgttttgacatttaga
attgcgcatatgattgccgatgaaggcgttcgtccttggcaggttcttgctattacgttt
actaacaaggctgcagcagagatgcgtgagcgtcttgaggcactgctacctaacaatatt
cgtggcatgtgggtctgtacgttccacgctatgtgcgttcgtctgctcagagaagatggc
gatcgtcttggttatggtcccaattttgctatctacgatgatgacgattcaaagcgcctg
gtaaaggccattttgtctgatttggatattgacgttcgtcagttcccactcaattctatt
cgttctaagatttctgctgctaaaaacgcgcttttgtaccccgatgatgttgaagctcag
gcggcaagtcctatggatcatgtggtggctcgcgtgtatcgtgcgctccagacgcgcttg
gataaggccaacgctatggactttgatgaccttctcattaaggcgtttgagctgctctct
aagtatcctgacgtgcttgccaagtatcaggagcgttttcgctacattaacgttgacgag
tatcaagatactaacggtgtccaatacgcaattaccaagctcttggcgtctaagtatcgc
aaccttatggttgttggcgatgatgaccagtccatctattcatggcgtggcgcagatatt
aaaaatatcttggcgtttgagaaagactatgaggaagcagttgttgttaagttggagcaa
aactatcgctcaactggtcatattctagctgctgctaacgctgttgttgcgcataattct
caccgtaagccaaagcgccttttcaccgatgaaggtgatggcgagaaaatccaggtgtat
caagcatctgatgagcgtgatgagggtgcatggattggttctgagatagaaaaactgcat
gataagggcatgtcatacgatagcattgccgtgttctatcgtactaacgcacagtctcgt
attctcgaggatatgctgctgagagccggtgttccttataagattgtcggcggcactcga
ttctttgatcgtgcagagattagagacgttatggcataccttaaggttgtcgtaaaccct
gatgatgatatggctgcgatgcgcgttattaatacacctcgtcgtggtattggtgcaacc
agcattcagaagattcagacatacgcactgcataatggcttgtcgtttttctcggcatgt
gaagcatgtgtgatggaggaaagtcttcttaccgcaaaagtaagaaatgcattggtagag
tttacgtctgctattgagcatggtcgtcatattgacggagagcttgacgaggttgttgag
gcaatcattgatcgttcgggtctcattcgtgcgcttgaagcagagcataccattgaggct
gatggacgtatcgagaacattcgagagttctttggtgttgcggcagagtttgacgagtct
cacgatgatgttgaagagacgcttgagagtttacagcagctcagagaagcgggagtactt
gacgcacaggatgctgcttcattgaatgctactggttttaatgctgctactggtacgctt
tctagtgttgctgtttcgccaactcctacttctcaggaagagaatctacatcctcaggtt
gtggcggagaagctccctgcatttatggaatggctggcgcttcgatcagacctggatagt
atggatggttctacctctgcggtaacgctcatgactattcattctgcaaagggtttggaa
ttcccagcagtatttgttgctggcatggaagaaggtatcttcccacacgcaaattatgag
gcagaggcagctcagctagaagaagaacgtaggcttgcgtatgttgctattacgcgtgcg
cgcaaacgtctttatttgacgtatgcgtctacgagaagaacgtatggttctgttcaggca
aatccagtatcgcgttttgtcggagaaattcctcaggagcatgttaaagctattggtgtt
ggttctgcaggcttttctggtgttggctgggcaaagcgtggagatcgacatggtactttt
ggctctgggcgtggttcagaggtctatggtggaaacgtttttggttcccgtacgcgctct
actggaggctctcaagccccacgtccagctcctattcagaaagatccagttcgtgcttct
gcaagttttgctgtgggagatcaggtctctcacaagacctttggtccaggcattgtttta
gcagttcagggcgatactattgaggttaaatttacgcgtactaataagacaaagaagctt
atgaagggctttgctccgatagtcaaaattgagggatag
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