Lancefieldella parvula: Apar_0422
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Entry
Apar_0422 CDS
T00983
Name
(GenBank) ABC transporter related
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
apv
Lancefieldella parvula
Pathway
apv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
apv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Apar_0422
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
apv02000
]
Apar_0422
Transporters [BR:
apv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Apar_0422
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
RsgA_GTPase
TsaE
Motif
Other DBs
NCBI-ProteinID:
ACV50853
UniProt:
C8W9R5
LinkDB
All DBs
Position
488470..490290
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AA seq
606 aa
AA seq
DB search
MANRAGGARPQNIGHTIRVFVSYLGHAKKRLMLVALLVSISGLAALLGTYMIKPVVAAVG
RGDVNAFTNLIVFTAVVYAIGALTSVGYTQIMVRAAQRIVFDIRRDLFEHIESLPLRFFD
QRTRGDIMSFFTNDVDTISEALNNSFANLVLAFIQMVGTLVLLIVLNWQLTLITILFDVL
IVVYARYASKRSAKHYSVQQKSLGVLNGFAEETISGLKVVKVFNHEDANFTDFQKVNEEL
RSSGTSAQSYAATMVPITVSLTYINYAVVTVVGALLAVNGHADVASLASYLVFVRQAAMP
FNQFTQLSNFLLTALAGAERIFAVMEMTPEVDEGKVKLLRVSGYESGDESWAWVKPSGEK
IPLAGDVRFDEVTFGYDEGQTVLANLSLFAKPGQKIAFVGSTGAGKTTITNLINRFYDVR
SGTITYDGIPINDIKKSALRSSLGIVLQDTHLFTGTIADNIRFGKLDATDDEVIAAAKIA
NADKFIRRMPRGYNTVLTSDGANLSQGQRQLLAIARAAIADPPVLILDEATSSIDTRTEA
LIEKGMDALMAGRTVFVIAHRLSTVRNANAIMVLEHGRIIERGTHDELIAQHGEYYQLYT
GSRELE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcgcgcaggaggagcacgtcctcaaaatatcggacataccattagagtgttt
gtttcgtacttgggtcatgctaagaaacgccttatgttggtggcacttcttgtttctatt
agtggtttagctgcgctccttggcacctatatgattaagcctgttgttgctgcggtgggc
aggggagacgtaaacgcattcaccaatctcattgtgtttacggctgttgtgtatgcaatt
ggtgctcttactagtgtgggttacacgcaaatcatggttcgcgctgctcagaggattgtt
tttgacataagacgagacctctttgagcatattgagtcgttgccgttaaggttttttgac
cagcgtacgcgtggcgatatcatgagtttctttacaaatgacgtggatactatttcagaa
gcgctcaacaatagttttgccaatcttgttctggcgtttattcagatggttggtacactt
gtgctgctcattgttcttaattggcagttgacgcttattactattctctttgatgtgttg
attgtagtatatgcgcgttatgcaagtaagcgttcagctaagcattattcagtgcaacaa
aagagccttggtgttcttaatggctttgcagaggagaccatttctggacttaaggtagtt
aaagtctttaatcatgaggatgctaattttactgattttcaaaaggtgaatgaggagcta
agaagctctggaacaagcgctcagtcatacgcagccacgatggttcctattactgtttct
ttgacttacattaactacgcagtagttaccgtggttggagcacttttggctgtaaatgga
cacgctgatgttgcaagtcttgcatcctacctggtttttgttcgccaggcagccatgccg
ttcaaccagttcacacagctctccaacttcctgctcactgctcttgccggtgccgagcgc
atctttgctgttatggagatgactcccgaggttgatgagggtaaggttaaactgcttcgc
gtaagtggctacgagtcaggtgacgaatcttgggcatgggttaaaccatctggcgagaaa
atccctcttgctggagacgtacgctttgatgaggtaacttttggttacgacgagggacag
acggttcttgctaacctttctttgtttgcaaaacctggccagaagattgcctttgttggt
tcaacaggtgctggtaaaacaactattaccaatcttattaaccgcttttatgatgttcgc
agtggcactatcacttatgatggcattcctattaacgatattaagaagtcagcacttcgc
tcttctttgggcattgtattgcaagacacgcacctgtttaccggtaccattgcagataat
atccgttttggtaagttagatgctaccgatgacgaagttattgctgcagcaaagattgca
aacgcggacaagtttattcgccgcatgcctcgtggttacaacactgtgcttacttccgac
ggtgctaatctttctcaaggtcaacgacagcttctggctattgcacgtgctgctattgct
gatcctcccgtacttattctagatgaagcaacttccagcattgatacgcgtactgaggca
cttatcgagaagggcatggatgcccttatggcaggtcgtaccgtctttgtaattgctcat
cgcttatctacggtacgtaatgcaaatgccattatggtacttgaacatggacgcattatt
gagcgcggcactcatgatgagttgattgctcagcatggtgagtattatcagctttatacc
ggctcacgtgaacttgagtag
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