Lancefieldella parvula: Apar_0639
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Entry
Apar_0639 CDS
T00983
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
apv
Lancefieldella parvula
Brite
KEGG Orthology (KO) [BR:
apv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apv03016
]
Apar_0639
Enzymes [BR:
apv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Apar_0639
Transfer RNA biogenesis [BR:
apv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Apar_0639
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACV51069
UniProt:
C8WAD1
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All DBs
Position
716862..718001
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AA seq
379 aa
AA seq
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MDALYIATSEELFAFCERAKTSHILAVDTEFLREKTYFPKLCLVQVSTGSEIAAIDPLLI
DDLTPLKELLENPEIVKILHACSQDLEVLLEKMDCACAPVFDTQVAAAFLGMRQQVSYAG
LVENFANVKLAKAESLTDWSKRPLDKEQLVYAEDDVRYLPAIYNQMVEKLIKLDRLSWLK
PEMDQHTNIDQYRRDPYQAYLRLKRSGSLTRRQLAIAREVCAWREEIAAKRDVPRKWVLS
DELIIEICRRVPTTSDRLRKIRGTEQISQGGVVHLLDAIKRGQKTPAGQCPKIEHHAHPS
AGSEGVVELMYALIRIVSEKEGIASPLIANKDDLTDLLLDKDDARLKTGWRYQLVGKQLV
GLLNGEVGLTVKNGRVELL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggacgcattgtatatagcaacctcagaagaacttttcgcattttgtgagcgagcaaag
acttcacatatccttgcagttgatacggagtttcttcgcgagaaaacctacttccccaag
ctttgcctggtacaggtttccacgggttctgagattgccgcgattgatccgctgctgatt
gatgacctcactccacttaaagaactcttggagaatccagaaattgtcaagattttacat
gcctgctcacaagaccttgaggtcttgctagaaaaaatggattgcgcatgtgctcctgta
tttgacacgcaggttgcagctgcatttttgggtatgcgacagcaggtgagctatgccggg
ttggtagaaaattttgccaacgttaaacttgctaaggctgagtcattaacggactggtca
aagcgacctcttgataaagaacagttggtatatgctgaggatgatgttagatatcttccc
gcaatttacaatcaaatggtcgagaagctcatcaaacttgaccgtttaagttggcttaag
ccggaaatggaccagcatacaaatattgatcagtaccgtcgagatccctatcaggcatat
cttcgtttgaagcgttctggttcacttacgcgcaggcagcttgctattgctcgagaggtt
tgcgcctggcgagaagagattgctgctaaaagagatgttccacgtaaatgggtgctttct
gatgaacttattatcgagatttgtcgccgtgtccctacaacatcagatagactacgcaag
attcgtggcactgagcagatttctcaaggtggggtagtacatcttctggatgcaattaaa
cgcggacaaaagacacctgctggtcagtgcccaaaaattgagcatcatgctcatccttct
gctggctcagaaggtgtcgttgagttaatgtatgcccttattagaattgtttcagaaaaa
gagggaattgcatctcctttaattgctaataaagacgatcttactgatctgcttttggac
aaggatgatgcaagacttaaaactggatggcgctaccaattagtaggtaaacaacttgtt
ggactactcaatggcgaggtagggcttacggttaaaaatggtcgagtagagctgctgtag
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