Lancefieldella parvula: Apar_0828
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Entry
Apar_0828 CDS
T00983
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
apv
Lancefieldella parvula
Pathway
apv00920
Sulfur metabolism
apv01100
Metabolic pathways
apv01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
apv00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Apar_0828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apv03400
]
Apar_0828
Enzymes [BR:
apv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Apar_0828
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Apar_0828
DNA repair and recombination proteins [BR:
apv03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Apar_0828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACV51257
UniProt:
C8W717
LinkDB
All DBs
Position
complement(914665..915684)
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AA seq
339 aa
AA seq
DB search
MTSLNTKVSRPEFDEVIALIEQASSIVVCAHTSPDGDAIGSGLALSSIIQRRWPSKTVTN
LLADADGEVPRIYKFLDGTDSFVPANKYEGIPDLFICVDLSTAGRLADAEALMNCSKTVA
VLDHHPYSNVYWNAGLVRPDAAATGVIITEFACHLGAELTPSEAQCLMCALVTDTGRFQY
QNADGEAFEVASLLVEAGASPSQIALYVYQSDRLAYLHLAAKVMERIRTFGEGRVAYSYV
TTADLSSSGVPLAEMDGLVDIVRCVEGTEIALFLKEVDGGKVRGNLRSKSQLDISGIARQ
MGGGGHTAAAGFTAEGTIDDVFTEIVPLLINLLALDKES
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcactgaatacaaaagtcagtcgtccagagtttgacgaggttatcgctcttatt
gagcaagcctcgtcaatcgttgtttgtgcacatacatctcctgatggtgacgctattggt
tctggattagcactttcttccattattcagagaagatggccaagcaaaactgttactaat
cttttggcagatgctgatggggaagtacctcgcatttataagtttcttgatggtactgat
agctttgtacctgcaaataagtacgagggaattccagatctttttatctgcgtagatctt
tctactgcaggtcgtttggctgatgcagaagcgctgatgaattgttctaagacagtggcg
gtgcttgaccatcatccgtatagcaatgtttattggaacgcgggactggtacgtcctgac
gcagcagcaactggtgttattatcacagagtttgcctgtcatttgggtgcagaacttacc
ccttctgaggcacagtgtcttatgtgcgcactagtaaccgatactggtcgttttcagtat
caaaatgctgacggtgaggcttttgaggttgcaagtttgttggtagaggcgggtgcttct
ccttctcagattgcactttacgtctatcagagcgatcgtttggcctatctccatcttgcc
gctaaagttatggaacgaatccgtacttttggtgagggtcgtgttgcgtacagctacgtc
accacagcagatctttcttcatcgggcgttcctcttgccgagatggatggtctagtagac
atcgtgcgttgtgttgagggaaccgaaattgcactcttccttaaagaggtagatggtgga
aaggttcgcggcaacctacgatctaaatcccagcttgatatctctggcattgctcgtcaa
atgggcggcggtggtcatactgctgctgcaggcttcaccgctgaaggtactattgatgac
gtgtttactgagatagtgcctctgctcattaatcttctcgcacttgacaaggagtcatag
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