Lancefieldella parvula: Apar_0898
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Entry
Apar_0898 CDS
T00983
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
apv
Lancefieldella parvula
Pathway
apv03030
DNA replication
apv03430
Mismatch repair
apv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Apar_0898
03430 Mismatch repair
Apar_0898
03440 Homologous recombination
Apar_0898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apv03032
]
Apar_0898
03400 DNA repair and recombination proteins [BR:
apv03400
]
Apar_0898
Enzymes [BR:
apv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Apar_0898
DNA replication proteins [BR:
apv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Apar_0898
DNA repair and recombination proteins [BR:
apv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Apar_0898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACV51327
UniProt:
C8W788
LinkDB
All DBs
Position
complement(1003050..1006886)
Genome browser
AA seq
1278 aa
AA seq
DB search
MAFVHLHNHSDFSILDGASRVPDMVSKAVEFGMPALALTDHGYLFGIPDFDLACRKYNEA
LKDFGQWCHDVECFEKGWDLEEPPADAPDAQEHDRVHAQWASDVQIWNQTHNIEAVKANK
PSPLIKPIFGCEAYFILDDCIEKGTKQVRYHLILLAKNETGYVNLMKMMSEAGSKEMFYY
KPRTTLEMLKRYHEGIICTSACVSGIIPRMLFEGRPEEAERWAKIYQDIFGDDFYLEIQD
HGLSDPSWGGYTDRTLAERIVKMGHDLGIKVVATNDNHYLTKEDASVQDIASCIGSGARV
DDENRKRMTGSEFYLKSEQEMRQIFSWCPEAIENTIEVANKCNYELDWTHMYLPKFPDLA
EGETSEERFRKECELGLARRYGDDWQNVVINEINVKDRFEYEYDIICKKGFADYFLIVQE
YVRWAKENGIGVGPGRGSAAGAIVAYAMDITSFDPLENGLMFERFLSPQRSEMPDIDMDF
DDERRLEVVEHVRQIYGSERVSHVITYSTIKAKQAINDACRVLGYPVYMGQRLSKMIPGD
PNAHLKFVLHKAQEGQKGADQYSADFEEAYENDPDARRIIDAALSIEGLHRGEGVHACAV
LIAPTPVNDHVPTKVDTKGGVEITQYEGHSVADMGLLKMDFLGLRTLTVISRAIKNVKDS
YGIDIDVDSIPFTDPEIYRLLREGRTAGVFQVESAGMTATIKGMRPTEYKHIVALIALYR
PGPLNAGMVTSYINRMNGREEVKDYDPRLHDILEETYGTMVYQEQVMQISMKMSGFTAGE
SDKVRKAVAKKKIKLMQEVVQHWDDGTDETMEAHWKNGAVRNGFDRSVAESIWDDVLEFA
SYAFNKSHSAGYAILVMQTAWIKAHYPHEFMAAVLTSYMGKTDKIVHYVSACRHEGIKIL
PPDINESGKDFTATKEGIRFGFAGIRGVGAGVGEAIMLERQKGGPFANIHDFVDRMDASQ
AKRNVVEALIKAGAFDSTGYTRMQMMSFVDKNNPQNIIDAATKRQKDKAVGQFSMFDMFA
EVEGSGFSDIVPEPDGVEWDRRFKLTKEYEVLGIYVSDHPLRPYEYALAKSRDYALAEIE
ENVEVQLPNGAMSQQFKVPEGKPIRFAGMVTNVMKRTTKNGDPMAIVTLEDMEGSVTIVM
FPKLYKKAARLLAGDVDPETGESQSDIFISVLGKLERSDRGDQVIAQEVSPIELNSANNT
PKTLVIHMPASQLERQVIETLGQIFSRYPGMDCIEIRVETDRGDVMRMEIPTRIDGRSMV
LLTELKDLIGQSGYAQIV
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgttcacctccataaccactcagatttttccattcttgatggagctagccgt
gttccagatatggttagtaaagctgtagagtttggtatgccagcacttgctcttactgat
catgggtatctctttggtattccagattttgaccttgcgtgccgtaaatacaatgaggca
cttaaagattttggccagtggtgtcatgatgtggaatgttttgaaaagggctgggactta
gaagagcctcctgcagacgctccagatgctcaagagcacgatagagtccatgctcagtgg
gcttctgacgttcaaatttggaatcaaacgcataatattgaggcggtaaaagccaacaag
ccttctccgcttatcaaaccaatttttggttgtgaggcttatttcattcttgatgattgt
attgagaagggtactaagcaggtacgttatcatcttattctgcttgctaaaaatgagacc
ggctatgtcaacttgatgaagatgatgtcagaggctggctcaaaagagatgttctattac
aagccacgtactacacttgagatgcttaagcgttatcacgagggtattatctgcacttca
gcctgtgtttctggcattattcctcgtatgctgtttgaaggccgtccagaagaagcagaa
cgctgggcaaaaatctatcaagatatctttggcgatgatttttatctagagattcaagat
catggtttatctgatccgagttggggtggatataccgatagaactcttgctgagcgtatt
gtaaaaatgggtcatgatcttggtattaaggtagttgctaccaacgataatcactatctc
actaaagaagacgcaagcgttcaagacattgcttcctgcattggttcgggcgctcgtgtt
gatgatgagaaccgtaagcgtatgacaggtagtgagttctatcttaagagtgagcaagaa
atgcgccagattttctcgtggtgtcctgaagctatcgagaataccattgaggttgcaaat
aagtgcaactatgagctggactggactcatatgtacctgccaaagttcccagacttggca
gaaggagagacctcagaagagcgttttagaaaagagtgcgagcttggtcttgcaaggcgt
tatggcgatgattggcaaaatgttgtcatcaacgaaattaacgttaaagatcgttttgag
tatgaatatgacattatctgcaaaaaaggttttgctgattacttcttgattgttcaggaa
tatgttcgctgggcaaaagagaatggcattggtgtaggccctggtcgtggatctgcagca
ggcgctatcgttgcatacgctatggatattacctcgtttgatcctcttgagaatggcctt
atgtttgagaggtttttgtctccacagcgttcagagatgccagatattgatatggacttc
gacgatgagcgtcgtcttgaggttgttgagcatgtccgtcagatttatggatctgagcgt
gtttctcacgttattacgtactcaaccattaaggctaaacaggcaataaacgatgcttgt
cgtgttttaggttatcccgtttacatgggtcagcgtctgtctaaaatgattcctggtgac
cctaatgctcaccttaagtttgttcttcataaggctcaagaaggtcaaaaaggcgccgat
cagtattctgctgactttgaagaggcctacgagaatgaccctgatgctagaagaattatt
gatgctgctctatctattgaaggcttgcatcgtggtgaaggtgtacatgcctgtgcagtt
ttgattgccccaacacctgttaatgatcacgttcccaccaaggttgatactaagggcggc
gtagagattacgcagtacgagggtcactctgtcgcagacatgggtcttcttaagatggac
ttcttgggacttagaaccttaacggttatttctcgcgcaattaaaaacgtgaaggatagc
tacggtattgatatcgatgtagatagcattccatttacagatccagagatttacagactt
ctgagagaaggacgaactgctggtgttttccaggttgagtctgcaggtatgacagcaacc
attaagggtatgagaccaacagaatataagcacatcgtcgcacttatcgctttgtatcgt
cctggtcctcttaacgcaggtatggttaccagctatatcaatcgtatgaacggtagagaa
gaagtcaaagattacgatccacgtcttcatgacatcttggaagaaacctatggaaccatg
gtctaccaagagcaggttatgcagatttccatgaaaatgtctggttttaccgcgggcgag
tctgacaaggttagaaaagcagtagcaaaaaagaagatcaaactcatgcaggaagttgtt
cagcactgggatgacggtactgatgagaccatggaggctcactggaaaaacggtgcagtt
cgtaatggatttgatcgttctgttgcagaaagcatctgggacgatgttcttgaatttgca
tcttatgcgtttaacaagtctcactctgctggttatgcaattcttgttatgcagaccgca
tggattaaggcgcattatccacacgagttcatggcagcagttcttacctcatatatgggc
aagacggataagattgttcactacgtaagtgcttgtcgtcatgagggaatcaagattctt
ccaccagatattaacgagtcaggtaaagactttacggctactaaagaaggtattcgtttt
ggctttgcaggaatccgtggtgtaggtgctggtgttggcgaagctattatgcttgagcgt
caaaagggtggtccttttgctaacatccacgattttgttgatcgcatggatgcaagtcag
gcaaagcgtaacgttgttgaagctcttatcaaggcaggagcttttgattctacaggctat
acccgtatgcagatgatgagttttgtggataagaataatcctcaaaatattatcgatgcc
gctactaagcgccaaaaagataaggctgttggtcagttctcaatgtttgacatgttcgca
gaagtagaaggttctggttttagtgatatcgttccagagccagatggtgttgagtgggat
agacgattcaagcttacaaaagagtatgaagtcttaggtatttacgtctccgatcatcca
cttcgtccgtatgagtatgcccttgctaagagcagggattatgctcttgcagaaattgaa
gaaaacgtagaggtgcagcttcctaatggtgctatgtctcagcagttcaaagttccagag
ggtaaacctattcgctttgctggcatggttactaatgttatgaagcgtactactaaaaac
ggcgatccaatggcaattgttacgcttgaagatatggagggtagtgtcactattgtcatg
ttccctaagctttacaagaaggctgcaagacttctggctggtgatgttgacccagagacc
ggcgagagccaaagcgatatctttatttctgttcttggaaagctggagcgttctgataga
ggtgatcaggttattgctcaggaggttagtcctattgagcttaacagtgccaataacacg
ccaaagacgcttgtcatccatatgcctgcttctcagcttgaaagacaggttatcgaaaca
cttggacagattttctcgcgttatcccggaatggactgtattgaaattagggtggaaacg
gataggggtgatgtcatgcgtatggaaattcctaccagaattgatggacgtagcatggtc
cttttgacagagctcaaagatcttatcggccaaagcggatatgcacagattgtttag
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