Lancefieldella parvula: Apar_0962
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Entry
Apar_0962 CDS
T00983
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
apv
Lancefieldella parvula
Pathway
apv03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
apv00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Apar_0962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
apv03011
]
Apar_0962
Ribosome [BR:
apv03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Apar_0962
Bacteria
Apar_0962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RNase_II_C_S1
S1_2
DUF2187
DUF7205
Motif
Other DBs
NCBI-ProteinID:
ACV51391
UniProt:
C8W7F1
LinkDB
All DBs
Position
complement(1086608..1087864)
Genome browser
AA seq
418 aa
AA seq
DB search
MSEIQNSSIFSLDEISDEEMNSLIDGTVTDFDEGDLVNGTVVKIERDEVLVDIGYKSEGV
IPARELSIRKDVNPAEIISLGEDVEALVLQKEDKEGRLVLSKKRAEYERAWKAVEDKFNA
GETVEGEVIEVVKGGLILDIGLRGFLPASLVDLRRVKDLGAFMGTRIEARVIEMDRNRNN
VVLSRRIVLEEARKAERQDILGKLQVGMKLKGTVSSIVEFGAFVDLGGIDGLVHISELSW
NHVNHPSEVVKVGQEVEVQVLDVDLNRERISLGLKQTSEDPWRVLVSKYPVDAIIEGTVT
KLVTFGAFVDLGNGVEGLVHISEMAKQHVTAPSQVCKVGDVVQVKVMEIDLDRRRISLSM
KAAAETLGIDIEVTPLPEEERAAAEAAAAEAEADLAAHEAATETKIASDKKDEEEASE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgagattcagaactcgtccatcttctctttggatgaaatttccgatgaggaaatg
aacagcctgattgacggcactgtcaccgattttgatgagggagatcttgtcaacggtacc
gtcgtcaagattgagcgcgatgaggtcctcgtagacattggttataagtctgagggcgtt
attcctgctcgtgagctttctattcgtaaagacgttaaccctgcagagattatctctctg
ggtgaggacgtcgaggctcttgtccttcagaaagaggacaaagagggtcgtctggttctt
tccaagaagcgtgctgagtacgagcgtgcttggaaggcagttgaagataagttcaacgct
ggcgagaccgttgagggtgaggttattgaggttgttaagggtggcctgattcttgacatt
ggcctccgtggcttcctgcctgcatcccttgttgacctccgtcgtgtcaaggatcttggt
gcattcatgggtactcgtattgaggctcgtgttattgagatggatcgcaaccgcaacaac
gttgttctttctcgccgtattgttcttgaggaggctcgtaaagcagagcgtcaggacatc
cttggtaagctccaggttggcatgaagctcaagggtaccgtttcctccatcgttgagttt
ggtgcgtttgttgatctcggcggcattgatggcctggttcacatctccgagctttcttgg
aaccacgttaaccacccatctgaggttgttaaggttggtcaggaggttgaggttcaggtt
ctcgacgttgaccttaaccgtgagcgtatctcccttggccttaagcagacttccgaggat
ccatggcgtgtacttgtttctaagtatccagtcgacgctatcatcgagggcacggtcact
aagcttgttacctttggtgcatttgttgaccttggcaatggcgttgagggccttgtccac
atttccgagatggctaagcagcatgtcaccgctccatctcaggtctgcaaggttggcgac
gttgtacaggtaaaggtcatggagattgatcttgaccgtcgtcgcatctctctgtctatg
aaggcagctgcagagactcttggaattgatattgaggtcactccacttccagaagaggag
cgtgcagcagcagaggcagcagcagctgaggctgaggctgatcttgcagctcatgaggca
gcaactgagacaaagattgcttctgataagaaggatgaagaagaggcttccgagtag
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