Lancefieldella parvula: Apar_1104
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Entry
Apar_1104 CDS
T00983
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
apv
Lancefieldella parvula
Pathway
apv03030
DNA replication
apv03410
Base excision repair
apv03420
Nucleotide excision repair
apv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Apar_1104
03410 Base excision repair
Apar_1104
03420 Nucleotide excision repair
Apar_1104
03440 Homologous recombination
Apar_1104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apv03032
]
Apar_1104
03400 DNA repair and recombination proteins [BR:
apv03400
]
Apar_1104
Enzymes [BR:
apv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Apar_1104
DNA replication proteins [BR:
apv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Apar_1104
DNA repair and recombination proteins [BR:
apv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Apar_1104
NER (nucleotide excision repair)
GGR (global genome repair) factors
Apar_1104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
BLOC1S3
NMT
Motif
Other DBs
NCBI-ProteinID:
ACV51532
UniProt:
C8W7U1
LinkDB
All DBs
Position
complement(1246780..1249518)
Genome browser
AA seq
912 aa
AA seq
DB search
MSDTTMPVNTADQNNATSAKEAAVKPRRTIAVIDGNSLMHRAFHAIRQPMAAPDGTPTGA
LFGFFNMFIKLVESFSPDGVICAFDKGKPQIRIDMLPQYKAQRPPMDPALHAQFPVVKEL
LKTLDVPVCQLEGWEGDDILGTLARRGEAEGYQMLLFTGDRDMYQLSTENVKIVSTRKGV
SDVSIMTPETVADLYAGITPELVPDFYGLKGDSSDNIPGVPGIGPKKAAALIVEYGSLDE
VIAHADEVKGKVGENLRAHIDDALLSRKVATIRTDAPLDINLDDAKFPTFDPNDVVKAFS
ALGFTGMTSRLARMAGGSASGVTAQTASATPALPIPSEFLQAGDASAALTAALENQEWIG
VAEDSAADTGALFSLSHTLWVSTEKALLKFEGENATAALLRILREARVAADDVKALLHEV
SPVDSSEPQKLDIETIDSDRLFDTGVAAYLLESDRSSFDINGLVELYFGSELPEPTDEIP
AAALRAVAARALVPVLTKKLEDDGSLELFTSLEMQLLPVLAAMERRGLYVDPQKLAEQSA
QLGEDIAQRVASIHQTAGEDFNLDSPSQLSHILFDVLKLPTYGLKKTRTGFYSTNAKVLG
ELAQEYQIVADVLEYRERAKIKSTYLDALPSLIRGDKRIHTTLNQTVTATGRLSSSDPNL
QNIPTRSELGHRVRTAFTVPEGSVFLACDYSQIELRLLAHLSADEHLVAAFNSGADFHAA
TAARVFGVPVEEVTPALRSRAKAVNFGIVYGQQAFGLATSLKISRKEAQEMIDRYFDAYP
GVRAYLDDSVRTAHECGYAITMYGRKRHIREFNQSNRQLIAFGERTAMNHPMQGSAADII
KIAMINVEKRLRDEGLTSKLILQIHDELDLEVPESEIETVSTLVKETMEDVVTLRVPLIA
DVSYGSNWAEAK
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatactactatgccagttaatactgcagatcaaaacaacgccacatcagccaaa
gaagccgcagttaaaccacgtagaactattgccgttattgacggaaactcgcttatgcat
cgagcatttcatgcaattcgtcagcctatggcggccccagatggaacgccaactggtgcg
ttgtttggcttctttaacatgtttatcaagcttgttgagtccttctcgccagatggtgtc
atttgtgcgtttgataagggcaaacctcagattcgtattgatatgttgcctcagtacaaa
gctcagcgtcctcctatggatcctgctttacacgcacagtttcctgtagtcaaagagctg
ctcaagacgctggatgttcccgtctgtcagcttgaaggctgggagggtgacgatatttta
ggtacccttgctcgtcgtggagaggcagagggttaccagatgctgctctttacaggcgac
cgtgatatgtaccagctctccacagaaaacgtcaagattgtctctacgcgcaagggtgtt
tccgatgtctcaattatgactccagagaccgtagctgacctttatgcaggtattacgcca
gagcttgtcccagatttctatggacttaagggagattcttccgacaacattcctggtgtt
ccgggaattggccccaagaaagctgctgctctcattgtggagtatggttcgcttgatgag
gttattgctcatgccgatgaggttaagggcaaggtgggagaaaaccttcgcgcccacatt
gatgacgcgctactctcccgcaaggttgctactattcgtaccgatgcaccgcttgatatc
aacctggatgacgctaagttcccaacatttgatccaaatgacgtggtcaaggcattttcg
gccttgggctttacaggcatgacctcaaggcttgctcgtatggctggtggttctgcttct
ggtgtaaccgcacaaactgcttctgctacgcctgcgcttcctattccgtcagaatttctg
caggcaggagacgcgtctgctgctttgaccgctgctcttgagaatcaggagtggattggt
gttgcagaggattctgccgccgacactggcgcactctttagtctttctcacacactttgg
gtgtctacagaaaaggcgcttctcaaatttgagggagaaaacgcaaccgcggcgctgttg
cgtattttgcgagaagctcgtgttgctgcagacgatgtcaaggcactgcttcatgaggta
agccctgttgattcatccgagccacagaaactggatattgagaccattgattctgaccgc
ctctttgatacgggcgttgctgcgtatctgcttgagtctgatcgttcaagttttgatatc
aacggcctggttgagttgtattttggctctgagcttcctgagcctacagatgagattcct
gccgcagcattaagagctgtagctgctagggctcttgtgcctgtgctcactaaaaagctt
gaagatgatggttccctggagctctttacttctctagagatgcaacttttgcctgtactt
gctgcgatggagcgtcgcggtctctacgttgatcctcaaaagcttgccgaacagtccgct
cagcttggtgaagacattgcgcaacgagtggcaagtattcaccagacagcaggcgaggat
ttcaacttggattctccaagtcagctttctcatatcttgtttgacgtgctcaagcttcca
acttatggtctcaaaaagactcgtactggcttctattccaccaacgcaaaagttcttgga
gagctggcacaggagtatcagattgttgctgatgttcttgagtatcgcgaacgcgccaaa
atcaaatctacctatctagatgctcttccttcacttattcgtggtgataagcgtatccat
accacgctcaatcagaccgttactgcaacgggcaggctttctagctctgatccaaacttg
cagaacattcctactcgttctgagctgggacatcgtgttcgcaccgcattcactgttccc
gagggcagcgtttttctcgcctgtgactactctcagattgagcttcgcctgctcgctcat
ctttctgctgatgagcacctagtagcagcattcaactctggcgctgacttccatgcagca
actgccgcacgtgtctttggcgttcctgttgaagaggtaaccccagcacttcgtagtcgt
gctaaggcagtcaactttggcattgtctatggtcagcaggcctttggtctggcaacgtct
cttaagatttctcgcaaggaagcgcaagagatgattgaccgttattttgatgcctatcct
ggtgttcgtgcgtatttagatgactccgtccgcacggctcacgagtgtggttacgctatt
accatgtatggtcgtaagcgtcacattagagagtttaaccaatcaaatcgccagcttatt
gcctttggcgagcgcaccgccatgaatcatcctatgcagggaagtgctgcagatattatc
aagattgcaatgattaatgtcgagaaacgcttgcgtgatgaaggtcttacgtcaaaactg
attcttcagatccacgacgaacttgacttggaagttccagagtcagagattgagacagtt
tctacgctggtaaaagagactatggaagacgttgttaccctgcgtgttcctttgattgct
gatgtcagctatggttccaattgggcagaggcaaagtaa
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