Lancefieldella parvula: Apar_1133
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Entry
Apar_1133 CDS
T00983
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
apv
Lancefieldella parvula
Pathway
apv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Apar_1133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apv03021
]
Apar_1133
03400 DNA repair and recombination proteins [BR:
apv03400
]
Apar_1133
Enzymes [BR:
apv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Apar_1133
Transcription machinery [BR:
apv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Apar_1133
DNA repair and recombination proteins [BR:
apv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Apar_1133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AMIN-like
RNA_pol_L_2
RteC
DUF4611
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ACV51561
UniProt:
C8W7X1
LinkDB
All DBs
Position
complement(1283726..1284667)
Genome browser
AA seq
313 aa
AA seq
DB search
MSEFIRPNVSVDEIGANVARVSVEPLERGYGDTLGNSLRRVLLSSLEGAAVEAIQIDGVQ
HEFTTVEGVYEDVTDIVLNVKGLVFRNTNNSDEAEASISVDGPCTVTGADLDVPMGYELV
NPAQHICALAEGAHLSMRLRIGNGRGYVSGEDNERENDPIGFIHVDSIFSPVRRCAKAVE
PCRVGRHTDYDRLVLEVETNGAISPREAVVEAANIINQHMSAFMGLTDFDETQEEASIFA
KADVEDDSELEKQVEDLDLSVRSYNCLKRAGIHSVRQLVDFSENDLLNIRNFGVKSIEEV
KEKLESMGLSLKA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatttatccgaccaaacgtgtcggtagatgaaatcggcgcaaacgtcgctcgt
gtgagcgtagagccgcttgagcgtggctatggtgacacgcttggcaactccctccgccgc
gtactgctttcctctcttgagggagctgcggttgaggccatccagattgatggcgttcag
catgagttcactacggttgaaggcgtctatgaggacgttacagatatcgttctgaacgtt
aagggcctagttttccgcaacaccaacaactctgatgaggctgaggcttctatctctgtt
gatggtccttgcacagtcactggtgctgatcttgatgttcctatgggctatgagctggtt
aaccctgctcagcacatttgcgctcttgctgagggagctcatctttcaatgagacttcgc
attggtaatggtcgcggttatgtttctggtgaggataacgagcgtgagaatgatccaatt
ggatttattcacgttgattcgattttctcgcctgttcgtcgctgcgctaaggctgttgag
ccttgccgtgttggccgtcacaccgactatgatcgtctggtgcttgaggttgagaccaat
ggtgcaatcagccctcgtgaggctgttgttgaggctgcaaacatcattaaccagcacatg
agcgcattcatgggacttactgattttgatgagactcaggaagaggcttcgatttttgct
aaggcagatgtcgaggatgattccgagcttgagaagcaggttgaggatttggatctttcc
gtccgttcttacaactgtctcaagcgtgcaggaattcactctgtccgccagctcgttgat
ttctctgagaacgatcttctcaacatcagaaactttggtgttaagtctattgaagaagtc
aaggaaaagctcgagagcatgggcctgtcccttaaggcttag
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