Acetobacter pasteurianus IFO 3283-01-42C: APA42C_12290
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Entry
APA42C_12290 CDS
T01818
Name
(GenBank) DNA gyrase subunit B Hsp90-like ATPase
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
apw
Acetobacter pasteurianus IFO 3283-01-42C
Brite
KEGG Orthology (KO) [BR:
apw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apw03032
]
APA42C_12290
03400 DNA repair and recombination proteins [BR:
apw03400
]
APA42C_12290
Enzymes [BR:
apw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
APA42C_12290
DNA replication proteins [BR:
apw03032
]
Prokaryotic type
DNA Topoisomerases
APA42C_12290
DNA repair and recombination proteins [BR:
apw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
APA42C_12290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
DUF4407
Motif
Other DBs
NCBI-ProteinID:
BAI17664
LinkDB
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Position
complement(1286120..1288558)
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AA seq
812 aa
AA seq
DB search
MTDLSQPTPSAVSEEYDAASISVLKGLDAVRKRPGMYIGDTDDGSGLHHMAFEIIDNAVD
EAQAGFASRCIVTFNADGSVSVRDNGRGIPTDMHAEEGISAAEVVLTRLHAGGKFNQNSY
KVSGGLHGVGAAVVNALSEWMEVRIWRNGQEHFIRFQHGERDAPLEVVGPSSEPSGTEVT
FKPSSETFPKTDFDFTILERRLRELAFLNSGLEIVLRDARVTPVREEKFFYEGGLEAFVN
WLDRSRTSLFAPPITGSLENPDNGIKVEFALTWNDSFHETMLCFTNNIPQRDGGAHLAGF
RQALTRVVGKYAESIAKKDAHSLQGEDMREGLTAVLSVKVPDPKFSSQTKDKLVSSEVQP
VVHAAAADIISHWFETHPKEAKIVISKVLDAASAREAARKARELTRRKGVLDVSSLPGKL
ADCQARDPAKAELFIVEGDSAGGTAKQGRDRRFQAILPLKGKILNVERARFDRMLGSAEI
GTLITALGTGIGRGEPEQGGFSIEKLRYHRIVIMTDADVDGSHIRTLLLTFFFRQMPELI
ERGYLYIAQPPLYRAKRGNEETYLKDDAALEQYLLNKALNNASFVYTDKRVVSGEELAAD
LPFIRQAAQAINRLSNRIPSWIIEQVALAGALTTDVEQLQQRMPALQRRLDAASAENEKS
WKAVASADGVELARNVRGVGEVYRIDPTMLASNDARWLTMQANRLQKDFAEGVALKNDTT
EHQLSGPADLYARLLAQGRRGLTINRFKGLGEMNDAQLWETTLDPAMRTLLQVRVGDVEE
AGDVFTTLMGDIVEPRRDFIVGNALKVANLDV
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacctctctcagcccacgccatctgccgtttccgaagagtatgatgccgcgtcg
atctctgtgctgaaggggctggatgctgtccgtaaacggcccggcatgtatattggtgat
acggatgatggttccggcctgcaccacatggcgtttgaaattattgataacgcagtggat
gaggctcaggctggttttgcatctcgctgcatcgtcactttcaacgcagatggcagcgtt
agcgtgcgtgataacgggcgcggcattcccacagatatgcatgctgaagaaggcatcagc
gctgcggaagtggtgctgacgcgcctgcatgctggcggcaagtttaaccagaactcctac
aaggtttctggtggtctgcacggcgtgggtgccgctgtggtgaatgcactctccgaatgg
atggaagtgcgcatctggcgtaacgggcaggaacatttcattcgcttccagcacggtgag
cgtgatgccccgctggaagtggttggtccttcttccgaaccctctggcacggaagttacc
ttcaaacccagcagtgaaacattccccaaaacggattttgatttcaccattctggaacgc
cgtctgcgtgaactggccttcctgaactccgggttggaaattgtgctgcgtgatgcacgc
gttacccccgtgcgggaagaaaaattcttttacgaaggcgggctggaagcttttgtaaac
tggctggatcggtctcgtacttcgctgtttgcaccgcccattactggcagtctggaaaac
ccggataacggcattaaggtagagtttgcactgacatggaacgatagcttccatgaaacc
atgctgtgcttcaccaacaacattccgcagcgcgatggtggggcccatctggcaggtttc
cgtcaggcgcttacgcgtgttgttggcaaatatgccgaaagcattgccaaaaaagatgcg
cactccctgcaaggggaagatatgcgtgaagggctgacggctgtcctgtccgttaaggtg
ccggaccccaagttctcatcccagaccaaggataagctggtttcttccgaagtgcagccg
gttgtgcatgcagcggcggcagacattatcagccattggtttgaaacccaccctaaagaa
gcaaaaattgttatctccaaggtgctggatgcggcttctgcacgtgaagcagcgcgcaag
gcacgtgagctgacccgccgcaaaggtgtgctggacgtttcatcacttcccggtaagctg
gcagattgtcaggcgcgtgaccccgccaaagctgaactgtttattgtggagggtgattcc
gcaggtggcaccgccaaacaagggcgtgatagacgctttcaggctattctgccgcttaaa
ggtaagattctgaacgtggaacgcgcccggtttgaccgtatgctgggttctgccgaaatt
ggcacgcttattaccgcactgggcacaggcattggccgtggtgaaccagaacagggtggc
ttctctattgagaaactccgctaccaccgtattgtcatcatgactgacgctgacgtggac
ggctctcatatccgtacactgctgctgaccttcttcttccgccagatgccggaactgatt
gagcgcggttacctctatatcgcccagccaccgctttaccgtgctaagcgcgggaatgaa
gaaacttacctgaaagatgatgcagcacttgagcaatatctgctcaacaaggccctgaac
aatgccagctttgtttatacagataaacgcgtagtaagtggtgaagaactggctgctgat
cttccattcatccggcaggcagcgcaggctattaaccgcctttccaaccgcatcccatct
tggattatcgaacaggtagccttggctggcgcgctgacaacggatgtggagcagcttcag
caacggatgccagcactgcagcggcgtcttgatgccgcatctgctgaaaatgaaaaaagc
tggaaagccgttgcgagtgcagacggtgtggaactggcccgcaatgtgcgtggggtaggg
gaagtgtaccgcattgacccaaccatgctggccagtaacgatgcccgctggctaaccatg
caagcaaaccgcctgcaaaaagactttgctgaaggcgtagcattgaaaaacgataccacc
gagcaccagcttagcggcccggctgatctttacgcccgattgctggcacagggccgccgt
gggctgaccatcaaccgctttaaaggtctgggcgaaatgaatgatgcccagctttgggaa
accacgctggacccggctatgcgcacactgttgcaggtacgcgtaggcgatgtggaagaa
gcgggcgatgttttcaccaccctgatgggcgatattgttgaaccgcgtcgtgacttcatt
gtcggcaatgcacttaaggttgccaatctggacgtctaa
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