Acetobacter pasteurianus IFO 3283-01-42C: APA42C_16230
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Entry
APA42C_16230 CDS
T01818
Symbol
iclR
Name
(GenBank) transcriptional regulator IclR family
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
apw
Acetobacter pasteurianus IFO 3283-01-42C
Pathway
apw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APA42C_16230 (iclR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apw03000
]
APA42C_16230 (iclR)
Transcription factors [BR:
apw03000
]
Prokaryotic type
Helix-turn-helix
IclR family
APA42C_16230 (iclR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_20
Dimerisation
HTH_27
TrmB
DUF742
GPP34
DUF2250
RNA_pol_Rpb5_N
FeoC
Motif
Other DBs
NCBI-ProteinID:
BAI17977
LinkDB
All DBs
Position
complement(1664768..1665565)
Genome browser
AA seq
265 aa
AA seq
DB search
MSKSQDTVPALRRAVRILDMVKASSRPPLAADVARQLDLPRSTVHGLLAVMVELGLLEKN
ASQGYRLGTRLLDWAGDVTEKRDLVTEFYHVLENRADLDAFTVTLTMLEGAEVVYVACRN
SATVLGASFRVGMRLPAIFTATGNAMLAGMDDTSFREWLALNPVSTWSEPLTPNGICSVT
TLVREIAEIRDRGYAVDDEQVHEGLWCFAASVRDHSGQTVAGIGISLPQTELSRFTVAQL
GNMAAGLAQAVSIRLGYRGERQDFS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatcgcaggacacggttcccgcattgcggcgggccgttcgtattcttgatatg
gtgaaggcttccagcaggccgcccttggccgcagatgtggcgcgccagctcgatttgcca
cgcagcacggtgcatggcctgctggctgttatggtggaattggggctgctggagaaaaac
gcatctcagggctacaggctgggcacacgcctgttggattgggccggagacgtgacggaa
aagcgcgatctggtaacggaattctaccacgtgttggagaatcgtgccgatctggatgcg
tttacggtaacgctgaccatgttggagggggcggaggttgtgtacgtggcctgccgcaat
agcgctacagtgcttggcgcctcttttagggtgggtatgcgcttgcctgccatatttacg
gccacaggtaatgccatgctggctggtatggatgatacgtctttcagagaatggctggct
cttaaccctgtttccacatggtcagaaccgctcacaccaaatggtatctgctctgtgacg
acattggtgcgtgaaatcgcagaaattcgtgacagaggatacgcggtggatgatgagcag
gtgcatgaagggctatggtgctttgctgcctctgtaagggatcattctgggcagaccgta
gccggtattggcattagcctgcctcaaacagaattaagccgtttcacggttgcgcaattg
ggcaatatggctgcggggttggcgcaggctgtttctatccgtttgggttatcgtggggaa
cggcaggatttttcctga
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integrated database retrieval system
