Acetobacter pasteurianus IFO 3283-01-42C: APA42C_16940
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Entry
APA42C_16940 CDS
T01818
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
apw
Acetobacter pasteurianus IFO 3283-01-42C
Pathway
apw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
APA42C_16940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apw03400
]
APA42C_16940
Enzymes [BR:
apw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
APA42C_16940
DNA repair and recombination proteins [BR:
apw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
APA42C_16940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF4130
XPC-binding
Motif
Other DBs
NCBI-ProteinID:
BAI18045
LinkDB
All DBs
Position
complement(1744442..1745695)
Genome browser
AA seq
417 aa
AA seq
DB search
MVEIVLAHQVDLATWRAATRHYVQKQVLPESISWRVAGKGETPWKLQAPDSADNDEPLNL
PRKLVTAVLEALQAHQPERFALLYRVVYRFMHGLLDMEDMREDPDIQQLRELVQNVKQET
EQFRLAFSIFSNQRQSKSLHYTPQNYIVEANGRFCIERDAQPWEVITPYRRMWWDGNQLH
FAMGEAEAVHVSADMWQKDGQGIWQGYPNTVLVPTLEDVAQASSLASLSAEAMDCRACSL
WQPANRTVFGEGVENTPLMFVGEQPGDQEDLAGRPFVGPAGQVFDRALEEAGILRNHVYV
TNAVKHFRFTWKNNRRLHQKPDQESVEACRIWLDAERKLVHPKLIVMLGVTAAQSLLKRP
VTISRERSRIFQLDEQCSGLVTVHPSYLLRLPNEEAKAREYTRFVEDLRLAQSFITQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggttgagattgttctggcacatcaggtagatctggcaacatggcgggctgctacgcgc
cattatgtgcaaaagcaggtgctccctgaaagtataagctggcgtgttgcaggcaaaggg
gaaacaccttggaagctgcaagcgccagattctgcagataatgatgaacctcttaacctt
ccgcgcaagttggtgacagcagtgctggaagcattgcaggcgcatcaacctgagcgtttc
gcacttttatatcgcgttgtttatcgttttatgcacggtttgctggatatggaggatatg
cgggaagatccggatattcagcaacttcgagagcttgtgcaaaacgttaaacaagagacg
gagcagtttcgtctggctttttcgatatttagtaatcaacgccaaagtaaaagcctgcat
tacacgccgcagaattatattgtggaagcaaacggacgcttctgcatagagcgcgacgcc
caaccgtgggaggttattacgccttaccggcgtatgtggtgggatggaaaccaactccac
ttcgctatgggtgaggcagaggccgtgcatgtatctgctgatatgtggcagaaagacggg
cagggtatctggcaggggtaccccaacactgtgctggtaccgacgttagaagatgttgcg
caggcatcttctctcgcgtctttgtcagcagaggctatggattgtcgagcctgctcctta
tggcaacccgccaaccgcacggtttttggggaaggggtggaaaatacgccccttatgttt
gttggagaacagccgggagatcaggaagatctggcaggccgtccatttgtggggcctgcg
gggcaagtgtttgatagagcactggaagaggctggcattttacgcaatcacgtttacgtg
acaaatgctgtaaagcactttcgtttcacatggaaaaacaacagacgcctgcatcagaag
cccgatcaggagtctgttgaggcctgccgaatctggttggatgcagagcgtaagctcgta
caccccaagctgattgttatgctgggcgttacggccgcgcaaagtcttctcaagcggcct
gttaccatctcgcgcgaacgctctcgtatttttcagttagatgagcagtgctccggattg
gtaacggtgcacccatcctacttgctgcgtctcccgaatgaagaggcgaaggcgcgtgaa
tacactcgctttgtagaagacttacgcttggcgcagagctttataacgcaataa
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