Acetobacter pasteurianus IFO 3283-01-42C: APA42C_17220
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Entry
APA42C_17220 CDS
T01818
Name
(GenBank) ribosomal RNA large subunit 23S rRNA pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
apw
Acetobacter pasteurianus IFO 3283-01-42C
Brite
KEGG Orthology (KO) [BR:
apw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apw03009
]
APA42C_17220
Enzymes [BR:
apw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
APA42C_17220
Ribosome biogenesis [BR:
apw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
APA42C_17220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
NfeD
Motif
Other DBs
NCBI-ProteinID:
BAI18072
LinkDB
All DBs
Position
complement(1768944..1769930)
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AA seq
328 aa
AA seq
DB search
MSVVNRTVSEDEAGIRLDRYFRRHYPHLTQGALQKLCRTGQIRVEGKRVEASTRLEPGQT
VRVPPIPMAAKPARDVPRPLDEKLAREIRKMVVYQDKHVIALNKPAGLAVQGGPGITKHV
DMMLDGLREEDDPRPRLVHRIDKDTSGLLLLARTPGVAAKLAASFRGRDVKKIYWAVVVG
RPDPLSGEIDQPLARLGAGPGSITVAADRKDADAQSARSVYEVLDSAARKFSWLELSPLT
GRTHQLRVHCESLGTPILGDPKYGGAAAHPSGFTDRLHLHARMLDMPHPAGGRLTVSAEL
PPHMRETFRTLGFVPGTTPPPSRRGGQG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgtcaatcgtaccgtaagcgaagacgaagctggtattcgtctggatcgctat
tttcgccgccattacccgcatcttacgcagggggcgcttcaaaaactgtgccgcacgggc
cagattcgtgttgagggcaaaagggtagaagcctccacccggctagagccggggcaaacg
gtgcgcgtgccgcccatacccatggctgccaaacccgcgcgcgatgtgccgcgcccgctg
gatgaaaaactggcgcgcgaaatccgcaagatggtggtgtatcaggacaagcacgtgatt
gcccttaacaagcccgcagggcttgccgtgcagggtggccccggcattaccaagcatgtt
gacatgatgctggatggcttgcgggaagaagatgatccgcgcccacggctggtgcaccgg
attgataaagatacctccggtcttctgctgttggcgcgcacccccggtgtggccgccaag
ctggcggcatctttccgtggccgggatgtaaaaaaaatctactgggcagttgtggtcggg
cggcctgatccactttcgggcgagatagatcagccgttggcccgtttgggtgctggcccc
ggttccattaccgtggcggcggaccgtaaggatgccgatgcgcaatctgcacggtctgtt
tatgaagtgctggattcggctgcgcgcaagttttcttggctggagctttcaccgcttact
gggcgcacgcatcagctccgtgtgcattgcgaatctttaggcacacctattttgggtgat
cccaaatacggtggagcggcagcccatccttctggctttacagacaggttgcatctgcat
gcccgtatgctggatatgccgcacccagcaggtgggcgtttaactgtaagtgccgaattg
ccgcctcatatgcgtgaaaccttccgaactcttgggtttgtgccgggcaccacaccgcca
ccttcacgccgtggtggccaaggataa
DBGET
integrated database retrieval system
