Acetobacter pasteurianus IFO 3283-01-42C: APA42C_19360
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Entry
APA42C_19360 CDS
T01818
Name
(GenBank) serine hydroxymethyl transferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
apw
Acetobacter pasteurianus IFO 3283-01-42C
Pathway
apw00260
Glycine, serine and threonine metabolism
apw00460
Cyanoamino acid metabolism
apw00630
Glyoxylate and dicarboxylate metabolism
apw00670
One carbon pool by folate
apw00680
Methane metabolism
apw01100
Metabolic pathways
apw01110
Biosynthesis of secondary metabolites
apw01120
Microbial metabolism in diverse environments
apw01200
Carbon metabolism
apw01230
Biosynthesis of amino acids
apw01240
Biosynthesis of cofactors
apw04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
apw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
APA42C_19360
09102 Energy metabolism
00680 Methane metabolism
APA42C_19360
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
APA42C_19360
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
APA42C_19360
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
APA42C_19360
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
APA42C_19360
Enzymes [BR:
apw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
APA42C_19360
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BAI18282
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Position
complement(2017398..2018690)
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AA seq
430 aa
AA seq
DB search
MSHTDLDRFFHASLAQTDPDVAAAIEGELKRQQEGIELIASENMASEAVLQAQGSVLTNK
YAEGYPGRRYYGGCVEVDKVENLAIDRVKTLFGAAFANVQPHSGANANQAAFMAMGKPGD
TVLGMSLAAGGHLTHGAAPNYSGKWFNSVQYGVRQQDGMLDYEEMERLAREHKPSIIVAG
GSAYPRIIDFARFRRIADEVGAFLMVDMAHFAGLVAAGLYPNPLEYAHIVTSTTHKTLRG
PRGGLILTNDEALAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALRPEFKEYQKAVQKNA
AVLAEVLVERGFDIVTGGTDSHLLLVDLRPKKVTGKAAEQALERAGITANKNAIPFDPEK
PAITSGVRLGSPAATARGFREEEFRQIGEMIDEVLTALAASSGEGNSEVENAVHERVKAL
CAKFPIYSRA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagccacacggatctggatcgctttttccatgcgtctctagcccagactgatccggat
gttgcagccgccattgaaggcgagttgaagcgtcagcaggaaggcattgaactgatagcc
agtgagaacatggcgtctgaagccgtgcttcaggctcagggcagcgtgctaaccaacaaa
tacgccgaaggttaccccggccgccgctattacggtggctgtgtggaagtggacaaggtt
gaaaacctagccatcgaccgcgtgaaaactctgtttggtgccgcatttgccaacgtgcag
ccgcattctggcgccaacgccaaccaggccgcgtttatggctatgggcaagccgggtgac
acggtgctgggcatgagccttgctgccggtggccaccttacacacggtgcagcccccaac
tattccggcaaatggttcaattccgtgcagtacggcgtgcgtcagcaagacggcatgctg
gactatgaggaaatggaacggctggcgcgtgagcacaaaccttccatcattgtggctggt
ggctctgcttatccgcgtatcattgattttgcccgcttccgccgcattgcggatgaagtt
ggggccttcctgatggtggatatggcgcattttgctggtctggtggctgctggcctgtat
ccaaacccgctggaatacgcacatattgtaacctccaccacgcataaaaccctgcgtggc
ccacgtggcggcctgatcctgaccaatgacgaagcattggccaaaaagatcaactccgct
gtgttccctggtttgcagggtggcccgctgatgcacgttattgccggtaaggccgtggcg
tttggtgaagcccttcgtccggaatttaaggaataccagaaagctgtgcagaaaaacgca
gccgttctggccgaagttctggtggaacgcgggttcgatatcgtaacaggtggtacggat
tcacatctgcttctggttgatctgcgccccaaaaaggtgaccggcaaagctgcggaacag
gctctggaacgcgctggtattacagccaacaaaaacgccattccgtttgacccggaaaag
ccagccatcacgtccggcgtgcgtctgggtagcccggcggcaacggctcgcggcttccgt
gaggaagaattccgccagattggtgaaatgattgacgaagttctgacagctttggccgct
tctagcggtgaaggtaacagcgaagttgaaaacgctgtgcatgaacgcgttaaagctctg
tgcgctaagttccctatctatagccgcgcataa
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